Factsheet for Bra031467.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039251.1-P	Field mustard	cytosol	78.25	78.88
Bra027106.1-P	Field mustard	cytosol	74.01	74.2
AT1G60980.1	Thale cress	cytosol, mitochondrion, peroxisome	73.47	73.67
Bra028706.1-P	Field mustard	cytosol	69.76	69.39
Bra009285.1-P	Field mustard	cytosol	69.5	69.13
Bra005927.1-P	Field mustard	cytosol	59.15	68.4
Bra019165.1-P	Field mustard	cytosol	52.25	56.29
Bra010064.1-P	Field mustard	cytosol	55.17	55.17
Bra022565.1-P	Field mustard	cytosol	54.38	54.38
PGSC0003DMT400000036	Potato	cytosol	51.72	53.42
Solyc01g093980.2.1	Tomato	cytosol	51.46	53.3
Bra013890.1-P	Field mustard	cytosol	53.05	53.19
Bra028277.1-P	Field mustard	cytosol, nucleus, peroxisome	53.32	52.89
VIT_15s0048g01320.t01	Wine grape	cytosol	53.58	52.6
GSMUA_Achr2P01010_001	Banana	cytosol, peroxisome, plastid	43.5	52.4
GSMUA_Achr8P19120_001	Banana	cytosol, extracellular, peroxisome	42.71	52.27
HORVU5Hr1G124120.1	Barley	cytosol	48.28	50.56
TraesCS5D01G566200.1	Wheat	cytosol, peroxisome, plastid	48.28	50.42
KRH65199	Soybean	cytosol	50.66	50.0
TraesCS5B01G560300.1	Wheat	cytosol, peroxisome, plastid	48.01	49.32
TraesCS4A01G319100.1	Wheat	cytosol, peroxisome, plastid	47.75	49.32
KRH48309	Soybean	cytosol	51.72	49.24
GSMUA_AchrUn_...	Banana	cytosol	40.58	47.37
EER90481	Sorghum	cytosol	46.95	46.7
Os03t0856700-02	Rice	cytosol, mitochondrion	45.09	45.7
TraesCS3D01G393900.1	Wheat	cytosol	42.97	45.51
TraesCS3A01G399800.1	Wheat	cytosol	42.44	44.69
TraesCS3B01G432800.1	Wheat	cytosol	42.18	44.17
HORVU3Hr1G089980.2	Barley	cytosol	41.64	43.98
Os07t0169700-01	Rice	plasma membrane	42.71	43.87
TraesCS3D01G394000.1	Wheat	cytosol, peroxisome, plastid	41.38	43.45
Zm00001d034898_P001	Maize	plastid	45.89	42.82
Bra014019.1-P	Field mustard	cytosol	40.05	42.3
EER95912	Sorghum	cytosol	41.11	40.58
Zm00001d007894_P001	Maize	cytosol	40.58	38.83
Bra022378.1-P	Field mustard	cytosol	27.85	30.09
Bra022377.1-P	Field mustard	cytosol	26.79	28.69
Bra001729.1-P	Field mustard	nucleus	23.61	15.42

Protein Annotations

MapMan:11.6.1.5	Gene3D:2.60.120.330	EnsemblPlantsGene:Bra031467	EnsemblPlants:Bra031467.1	EnsemblPlants:Bra031467.1-P	InterPro:DIOX_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M4ERP1
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF140	SUPFAM:SSF51197	UniParc:UPI0002544E57	:	:	:

Description

AT1G60980 (E=1e-161) ATGA20OX4 | ATGA20OX4 (ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 4); gibberellin 20-oxidase

Coordinates

chrA01:+:17190999..17192626

Molecular Weight (calculated)

43224.1 Da

IEP (calculated)

4.919

GRAVY (calculated)

-0.479

Length

377 amino acids

Sequence
(BLAST)

001: MECITKLPFN VNETEDSLLT TFDSMVLHDQ ENQVPQEFVW PDHQKPSPNV PILQVPLIDL AGFLSEDPFL VSEATRLVAE GAKQHGFFLV TNHGVDERLL
101: SSAYTSMDKF FLSPTCEKQK ALGEWRESWG YANSYFGKYK KNLPWKEMLS FSFSPEEKTD NHSQIVKDFI IEKMGDGYND FGRVYQEYAE AMSNLSLKIM
201: ELLGMSLGLN RSHFKDFFED NESILRLNYY PKCKQPDVVL GTGPHCDPTS LTILQQDHVS GLQVLVDNQW HSVPPNPQAL VVNIGDTFRA LTNGIYKSSL
301: HQAVVNSETE RKTIAFFLSP KVDKVVKPPE ELEGERVYPD FTWSMLHEFV KKHYKTDENT LEEFTKWLKK AETSNEG

Best Arabidopsis Sequence Match ( AT1G60980.1 )
(BLAST)

001: MECIIKLPQR FNKNKSKKNP LRIFDSTVLN HQPDHIPQEF VWPDHEKPSK NVPILQVPVI DLAGFLSNDP LLVSEAERLV SEAAKKHGFF LVTNHGVDER
101: LLSTAHKLMD TFFKSPNYEK LKAQRKVGET TGYASSFVGR FKENLPWKET LSFSFSPTEK SENYSQTVKN YISKTMGDGY KDFGSVYQEY AETMSNLSLK
201: IMELLGMSLG IKREHFREFF EDNESIFRLN YYPKCKQPDL VLGTGPHCDP TSLTILQQDQ VSGLQVFVDN QWQSIPPIPQ ALVVNIGDTL MALTNGIYKS
301: CLHRAVVNGE TTRKTLAFFL CPKVDKVVKP PSELEGERAY PDFTWSMFLE FTMKHYRADM NTLEEFTNWL KNKGSF

Arabidopsis Description

GA20OX4Gibberellin 20 oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C955]
SUBAcon: [mitochondrion,peroxisome,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.