Factsheet for Bra001729.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22995	Canola	cytosol	48.53	79.32
CDY22994	Canola	cytosol	48.53	79.32
CDX82318	Canola	cytosol	48.53	79.32
CDX82317	Canola	cytosol	48.53	79.32
Bra022377.1-P	Field mustard	cytosol	41.59	68.18
Bra022378.1-P	Field mustard	cytosol	32.06	53.01
VIT_03s0063g01340.t01	Wine grape	cytosol	31.37	52.16
KRH49793	Soybean	cytosol	30.85	51.9
KRG89226	Soybean	cytosol	31.37	49.73
GSMUA_Achr7P08230_001	Banana	cytosol	27.04	48.3
GSMUA_Achr7P08240_001	Banana	cytosol	26.17	48.09
Os03t0618300-01	Rice	cytosol	28.42	46.59
TraesCS4A01G234100.1	Wheat	cytosol	27.9	46.26
TraesCS4B01G081200.1	Wheat	cytosol	27.73	45.98
TraesCS4D01G079900.1	Wheat	cytosol	27.56	45.69
OQU91363	Sorghum	cytosol	27.73	44.94
EER91221	Sorghum	cytosol	25.48	42.86
HORVU4Hr1G013840.1	Barley	cytosol	28.08	42.08
Zm00001d033327_P001	Maize	cytosol	22.18	41.56
KXG38014	Sorghum	cytosol	24.78	41.45
Zm00001d013725_P002	Maize	cytosol	25.48	39.62
Os08t0249900-00	Rice	cytosol, nucleus, peroxisome	16.81	36.33
Bra019165.1-P	Field mustard	cytosol	15.94	26.29
Bra022565.1-P	Field mustard	cytosol	16.98	25.99
Bra010064.1-P	Field mustard	cytosol	16.29	24.93
Bra028706.1-P	Field mustard	cytosol	16.29	24.8
Bra028277.1-P	Field mustard	cytosol, nucleus, peroxisome	16.29	24.74
Bra013890.1-P	Field mustard	cytosol	16.12	24.73
Bra005927.1-P	Field mustard	cytosol	13.86	24.54
Bra009285.1-P	Field mustard	cytosol	15.77	24.01
Bra031467.1-P	Field mustard	cytosol	15.42	23.61
Bra014019.1-P	Field mustard	cytosol	14.56	23.53
Bra039251.1-P	Field mustard	cytosol	15.08	23.26
Bra027106.1-P	Field mustard	cytosol	14.21	21.81

Protein Annotations

MapMan:15.5.5.2	Gene3D:2.40.330.10	Gene3D:2.60.120.330	InterPro:B3_DNA-bd	EnsemblPlantsGene:Bra001729	EnsemblPlants:Bra001729.1
EnsemblPlants:Bra001729.1-P	InterPro:DIOX_N	InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016491	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR003340	InterPro:IPR005123
InterPro:IPR015300	InterPro:IPR027443	UniProt:M4CBZ9	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF02362	PFAM:PF03171
PFAM:PF14226	PRINTS:PR00682	PFscan:PS50863	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF127
SMART:SM01019	SUPFAM:SSF101936	SUPFAM:SSF51197	UniParc:UPI00025404E4	SEG:seg	:

Description

AT3G19000 (E=3e-129) | oxidoreductase, 2OG-Fe(II) oxygenase family protein

Coordinates

chrA03:-:18097731..18106862

Molecular Weight (calculated)

66082.0 Da

IEP (calculated)

6.679

GRAVY (calculated)

-0.550

Length

577 amino acids

Sequence
(BLAST)

001: MGVLDEAFIQ APEHRPKTHL KHSDDHILSK EIPTIDLSSL QDPNCDKTAL ATEIAEACMR WGFFQVINHG LSLDLMRRVE KTVAEFFSLT LEEKRRVKRD
101: EVNPMGYHDG EHTKNVRDWK EIFDFFLQDS TTVPATTEPE DTELRKLTNP WPQNPSDFRE VCQEYAREVE KLAFKLLELI SISLGLPGDR LTGYFKDQTS
201: FLRFNHYPPC PNPELALGVG RHADAGVITV LAQDSVGGLQ VSRRSDGQWF SVKPNPDAFI INIGNCMQRV PDKFVSRFKD ELSVAVALTV PDGHVWRVGL
301: RKADNNNKIW FQDGWQEFVD RYSIRIGYLL IFRYEGNSAF SVCIYNLPQS EINYHSTGLM DSASHNNHFK RPRLFEDLED EDAETLHTTA SAIQSFFTGP
401: VKPEEATPTQ TSKVPKKRGR KKKNADHPEE VNSSAPRDDD PESRSKFYES ASARKRTVNA EERERAVNAA KTFEPTNPFF RVVLRPSYLY RGCIMYLPSG
501: FAEKYLSGIS GFIKVQLGEK QWPVRCLYKA GRAKFSQGWY EFTVENNLGE GDVCVFELLR TRDFVLKVTA YRVNEYV

Best Arabidopsis Sequence Match ( AT3G18990.1 )
(BLAST)

001: MPRPFFHKLI FSSTIQEKRL RVPDKFVSKF KDELSVAVAL TVPDGHVWRV GLRKADNKIW FQDGWQEFVD RYSIRIGYLL IFRYEGNSAF SVYIFNLSHS
101: EINYHSTGLM DSAHNHFKRA RLFEDLEDED AEVIFPSSVY PSPLPESTVP ANKGYASSAI QTLFTGPVKA EEPTPTPKIP KKRGRKKKNA DPEEINSSAP
201: RDDDPENRSK FYESASARKR TVTAEERERA INAAKTFEPT NPFFRVVLRP SYLYRGCIMY LPSGFAEKYL SGISGFIKVQ LAEKQWPVRC LYKAGRAKFS
301: QGWYEFTLEN NLGEGDVCVF ELLRTRDFVL KVTAFRVNEY V

Arabidopsis Description

VRN1AP2/B3-like transcriptional factor family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ83]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.