Factsheet for Bra022565.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27101	Canola	cytosol, nucleus, peroxisome	99.47	99.47
CDX91609	Canola	cytosol, nucleus, peroxisome	97.88	97.62
AT5G51810.1	Thale cress	cytosol, nucleus, peroxisome	90.45	90.21
Bra028277.1-P	Field mustard	cytosol, nucleus, peroxisome	89.12	88.42
Bra019165.1-P	Field mustard	cytosol	69.5	74.86
Bra013890.1-P	Field mustard	cytosol	71.62	71.81
VIT_15s0048g01320.t01	Wine grape	cytosol	63.4	62.24
Bra005927.1-P	Field mustard	cytosol	53.05	61.35
Solyc01g093980.2.1	Tomato	cytosol	59.15	61.26
Bra009285.1-P	Field mustard	cytosol	61.54	61.21
GSMUA_Achr8P19120_001	Banana	cytosol, extracellular, peroxisome	49.6	60.71
PGSC0003DMT400000036	Potato	cytosol	58.62	60.55
Bra028706.1-P	Field mustard	cytosol	60.21	59.89
GSMUA_Achr2P01010_001	Banana	cytosol, peroxisome, plastid	49.6	59.74
TraesCS5D01G566200.1	Wheat	cytosol, peroxisome, plastid	55.97	58.45
HORVU5Hr1G124120.1	Barley	cytosol	55.7	58.33
KRH65199	Soybean	cytosol	58.89	58.12
TraesCS4A01G319100.1	Wheat	cytosol, peroxisome, plastid	55.97	57.81
TraesCS5B01G560300.1	Wheat	cytosol, peroxisome, plastid	55.97	57.49
Bra027106.1-P	Field mustard	cytosol	56.5	56.65
KRH48309	Soybean	cytosol	59.42	56.57
Bra010064.1-P	Field mustard	cytosol	55.7	55.7
GSMUA_AchrUn_...	Banana	cytosol	47.48	55.42
EER90481	Sorghum	cytosol	55.7	55.41
Bra039251.1-P	Field mustard	cytosol	54.91	55.35
Bra031467.1-P	Field mustard	cytosol	54.38	54.38
Os03t0856700-02	Rice	cytosol, mitochondrion	53.05	53.76
TraesCS3A01G399800.1	Wheat	cytosol	49.87	52.51
TraesCS3D01G394000.1	Wheat	cytosol, peroxisome, plastid	49.87	52.37
HORVU3Hr1G089980.2	Barley	cytosol	49.34	52.1
Zm00001d034898_P001	Maize	plastid	55.44	51.73
TraesCS3D01G393900.1	Wheat	cytosol	48.81	51.69
TraesCS3B01G432800.1	Wheat	cytosol	49.34	51.67
Os07t0169700-01	Rice	plasma membrane	50.13	51.5
EER95912	Sorghum	cytosol	48.54	47.91
Zm00001d007894_P001	Maize	cytosol	48.28	46.19
Bra014019.1-P	Field mustard	cytosol	41.64	43.98
Bra022378.1-P	Field mustard	cytosol	28.12	30.37
Bra022377.1-P	Field mustard	cytosol	26.79	28.69
Bra001729.1-P	Field mustard	nucleus	25.99	16.98

Protein Annotations

MapMan:11.6.1.5	Gene3D:2.60.120.330	EnsemblPlantsGene:Bra022565	EnsemblPlants:Bra022565.1	EnsemblPlants:Bra022565.1-P	InterPro:DIOX_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M4E1B7
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF140	SUPFAM:SSF51197	UniParc:UPI000254719D	:	:	:

Description

AT5G51810 (E=7e-203) GA20OX2, AT2353, ATGA20OX2 | GA20OX2 (GIBBERELLIN 20 OXIDASE 2); gibberellin 20-oxidase

Coordinates

chrA02:+:8895864..8897263

Molecular Weight (calculated)

42865.8 Da

IEP (calculated)

6.052

GRAVY (calculated)

-0.366

Length

377 amino acids

Sequence
(BLAST)

001: MAIICTTASP AEKEQEPKQS FENDQTPPIV FNPSLLNLQS QIPNQFIWPD EEKPSIDIPV LNVPFIDLSS QDSTLEASRL IAEACTKHGF FLVVNHGVSE
101: SLISDAHRLM GSFFDMPLAG KQRAQRKLGE SSGYASSFTG RFSTKLPWKE TLSFRFSNEN NGSRTVQDYF SCTLGQEFEQ FGNVYQEYCE AMSSLSLKIM
201: ELLGLSLGVN RDYFRGFFEE NDSIMRLNHY PPCQTPDLTL GTGPHCDPSS LTILHQDHVN GLQVFVDNQW RSIPPNPKAF VVNIGDTFMA LSNGIFKSCL
301: HRAVVNRESA RKSMTFFLCP KRDKVVKPPS EILDKIPRRY PDFTWPMFLE FTQKHYRADE NTLDSFSNWV ITNKNLI

Best Arabidopsis Sequence Match ( AT5G51810.1 )
(BLAST)

001: MAILCTTTSP AEKEHEPKQD LEKDQTSPLI FNPSLLNLQS QIPNQFIWPD EEKPSIDIPE LNVPFIDLSS QDSTLEAPRV IAEACTKHGF FLVVNHGVSE
101: SLIADAHRLM ESFFDMPLAG KQKAQRKPGE SCGYASSFTG RFSTKLPWKE TLSFQFSNDN SGSRTVQDYF SDTLGQEFEQ FGKVYQDYCE AMSSLSLKIM
201: ELLGLSLGVN RDYFRGFFEE NDSIMRLNHY PPCQTPDLTL GTGPHCDPSS LTILHQDHVN GLQVFVDNQW QSIRPNPKAF VVNIGDTFMA LSNGIFKSCL
301: HRAVVNRESA RKSMAFFLCP KKDKVVKPPS DILEKMKTRK YPDFTWSMFL EFTQKHYRAD VNTLDSFSNW VITNNNPI

Arabidopsis Description

GA20OX2Gibberellin 20 oxidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39111]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.