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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:
  • peroxisome 1
  • mitochondrion 1
  • plastid 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plastid
Any Predictor:cytosol, peroxisome, plastid
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G566200.1 Wheat cytosol, peroxisome, plastid 96.71 97.78
TraesCS5B01G560300.1 Wheat cytosol, peroxisome, plastid 97.81 97.28
HORVU5Hr1G124120.1 Barley cytosol 93.42 94.72
GSMUA_Achr8P19120_001 Banana cytosol, extracellular, peroxisome 61.64 73.05
GSMUA_Achr2P01010_001 Banana cytosol, peroxisome, plastid 61.92 72.2
EER90481 Sorghum cytosol 73.97 71.24
Os03t0856700-02 Rice cytosol, mitochondrion 69.86 68.55
Zm00001d034898_P001 Maize plastid 73.42 66.34
PGSC0003DMT400086432 Potato cytosol 28.22 66.03
PGSC0003DMT400092587 Potato cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole 28.22 63.98
CDY49714 Canola cytosol, nucleus, peroxisome 60.55 63.14
VIT_16s0022g02310.t01 Wine grape cytosol 66.03 63.09
Bra019165.1-P Field mustard cytosol 60.27 62.86
CDY72226 Canola mitochondrion 44.38 62.55
GSMUA_AchrUn_... Banana cytosol 55.34 62.54
PGSC0003DMT400036523 Potato cytosol 52.88 62.06
KRG91415 Soybean cytosol 64.93 61.88
VIT_15s0048g01320.t01 Wine grape cytosol 64.93 61.72
PGSC0003DMT400062314 Potato cytosol 63.84 61.64
Solyc03g006880.2.1 Tomato cytosol 63.56 61.38
KRH35405 Soybean cytosol 60.82 60.82
KRH38652 Soybean cytosol 63.29 60.47
PGSC0003DMT400090397 Potato cytosol 60.55 59.25
TraesCS3A01G399800.1 Wheat cytosol 58.08 59.22
PGSC0003DMT400042644 Potato cytosol 54.25 58.93
CDX92707 Canola cytosol, nucleus, peroxisome 61.64 58.75
PGSC0003DMT400071866 Potato cytosol 60.27 58.67
Solyc06g035530.2.1 Tomato cytosol 59.45 58.33
PGSC0003DMT400091205 Potato cytosol, nucleus, peroxisome 25.21 58.23
AT4G25420.1 Thale cress cytosol, nucleus, peroxisome 60.0 58.09
Solyc11g072310.1.1 Tomato cytosol 60.27 58.05
KRH09174 Soybean cytosol 48.22 57.89
Solyc01g093980.2.1 Tomato cytosol 57.26 57.42
Solyc09g009110.2.1 Tomato cytosol 59.45 57.41
CDY55723 Canola cytosol, nucleus, peroxisome 58.63 56.91
CDX94446 Canola cytosol, nucleus, peroxisome 58.63 56.91
PGSC0003DMT400090198 Potato mitochondrion 13.97 56.67
Bra013890.1-P Field mustard cytosol 58.36 56.65
PGSC0003DMT400000036 Potato cytosol 56.44 56.44
CDY27101 Canola cytosol, nucleus, peroxisome 58.08 56.23
Bra022565.1-P Field mustard cytosol 57.81 55.97
AT5G51810.1 Thale cress cytosol, nucleus, peroxisome 57.81 55.82
CDY58871 Canola cytosol, endoplasmic reticulum, peroxisome 57.81 55.82
CDX91609 Canola cytosol, nucleus, peroxisome 57.81 55.82
CDX99892 Canola cytosol, nucleus, peroxisome 57.81 55.67
Solyc06g050110.1.1 Tomato cytosol 55.34 55.65
Bra028277.1-P Field mustard cytosol, nucleus, peroxisome 57.81 55.53
CDY00499 Canola cytosol, nucleus, peroxisome 57.81 55.53
CDX99893 Canola cytosol, nucleus, peroxisome 57.81 55.53
Bra005927.1-P Field mustard cytosol 49.59 55.52
KRH65199 Soybean cytosol 58.08 55.5
CDX81038 Canola cytosol, nucleus, peroxisome 56.99 55.03
PGSC0003DMT400088638 Potato cytosol 38.08 54.94
CDY00263 Canola cytosol, nucleus, peroxisome 41.64 54.48
CDX70015 Canola cytosol, nucleus, peroxisome 56.16 54.09
CDX98998 Canola cytosol, nucleus, peroxisome 56.16 54.09
Bra009285.1-P Field mustard cytosol 55.89 53.83
KRH48309 Soybean cytosol 58.08 53.54
AT5G07200.1 Thale cress cytosol, nucleus, peroxisome 55.62 53.42
Bra028706.1-P Field mustard cytosol 55.07 53.03
CDY05017 Canola cytosol, nucleus, peroxisome 55.07 53.03
CDY14054 Canola cytosol, nucleus, peroxisome 55.07 53.03
AT1G60980.1 Thale cress cytosol, mitochondrion, peroxisome 53.97 52.39
PGSC0003DMT400088528 Potato cytosol, peroxisome, plastid 18.36 51.94
Solyc10g045690.1.1 Tomato cytosol, nucleus, peroxisome 26.85 51.58
CDY13228 Canola cytosol 10.41 51.35
Bra027106.1-P Field mustard cytosol 52.6 51.06
CDY52529 Canola cytosol, nucleus, peroxisome 52.6 50.39
PGSC0003DMT400091526 Potato cytosol 32.88 50.21
Bra010064.1-P Field mustard cytosol 51.78 50.13
Bra039251.1-P Field mustard cytosol 50.14 48.93
CDY64867 Canola cytosol 49.86 48.66
PGSC0003DMT400097234 Potato cytosol, mitochondrion, plastid 16.71 48.41
Bra031467.1-P Field mustard cytosol 49.32 47.75
CDY60083 Canola vacuole 50.68 46.02
CDY64866 Canola cytosol, nucleus, peroxisome 38.9 45.81
CDY12880 Canola cytosol, nucleus, vacuole 52.6 45.39
TraesCS1A01G263600.1 Wheat cytosol 49.59 45.36
CDY44829 Canola cytosol 48.49 45.27
TraesCS3A01G406200.1 Wheat plastid 52.6 43.44
Solyc10g045770.1.1 Tomato cytosol 12.88 43.12
Solyc10g046820.1.1 Tomato cytosol, nucleus, peroxisome 23.01 42.64
PGSC0003DMT400086504 Potato cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 12.88 41.59
PGSC0003DMT400089703 Potato nucleus 16.99 41.33
CDY13227 Canola cytosol 19.18 40.94
TraesCS4A01G234100.1 Wheat cytosol 27.95 29.31
Protein Annotations
EnsemblPlants:TraesCS4A01G319100.1EnsemblPlantsGene:TraesCS4A01G319100Gene3D:2.60.120.330GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0016491GO:GO:0055114InterPro:DIOX_NInterPro:IPNS-likeInterPro:IPR005123
InterPro:IPR027443InterPro:Oxoglu/Fe-dep_dioxygenasePANTHER:PTHR10209PANTHER:PTHR10209:SF140PFAM:PF03171PFAM:PF14226
PFscan:PS51471SEG:segSUPFAM:SSF51197MapMan:11.6.1.5::
Description
No Description!
Coordinates
chr4A:-:608043668..608044864
Molecular Weight (calculated)
40707.6 Da
IEP (calculated)
6.728
GRAVY (calculated)
-0.236
Length
365 amino acids
Sequence
(BLAST)
001: MVRPVFDAAV LSGRSDIPSQ FIWPEGESPT PDAAEELHVP LINIGGMLSG DAAAAAEVTR LVGEACERHG FFQVVNHGID AELLADAHRC VDNFFTMPLP
101: EKQRALRRPG ESCGYASSFT GRFASKLPWK ETLSFRSCPS DPALVVDYIV ATLGEDHRRL GEVYARYCSE MSRLSLEIME VLGESLGVGR AHYRRFFEGN
201: DSIMRLNYYP PCQRPLETLG TGPHCDPTSL TILHQDNVGG LQVHTEGRWR SIRPRADAFV VNIGDTFMAL SNGRYKSCLH RAVVNSRVPR KSLAFFLCPE
301: MDKVVAPPGT LVDASNPRAY PDFTWRSLLD FTQKHYRADM KTLEVFSSWI VQQQQGQLAL QPAMT
Best Arabidopsis Sequence Match ( AT4G25420.1 )
(BLAST)
001: MAVSFVTTSP EEEDKPKLGL GNIQTPLIFN PSMLNLQANI PNQFIWPDDE KPSINVLELD VPLIDLQNLL SDPSSTLDAS RLISEACKKH GFFLVVNHGI
101: SEELISDAHE YTSRFFDMPL SEKQRVLRKS GESVGYASSF TGRFSTKLPW KETLSFRFCD DMSRSKSVQD YFCDALGHGF QPFGKVYQEY CEAMSSLSLK
201: IMELLGLSLG VKRDYFREFF EENDSIMRLN YYPPCIKPDL TLGTGPHCDP TSLTILHQDH VNGLQVFVEN QWRSIRPNPK AFVVNIGDTF MALSNDRYKS
301: CLHRAVVNSE SERKSLAFFL CPKKDRVVTP PRELLDSITS RRYPDFTWSM FLEFTQKHYR ADMNTLQAFS DWLTKPI
Arabidopsis Description
GA20OX1Gibberellin 20 oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39110]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.