Factsheet for TraesCS1A01G263600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G263700.1	Wheat	cytosol	96.49	93.45
TraesCS1B01G274200.1	Wheat	cytosol	95.74	92.72
HORVU1Hr1G063780.4	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	73.18	70.19
Os05t0421900-00	Rice	cytosol	70.18	68.63
TraesCS3A01G406200.1	Wheat	plastid	65.66	59.28
GSMUA_Achr6P25910_001	Banana	cytosol	44.11	55.87
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	45.36	55.52
GSMUA_Achr8P32560_001	Banana	cytosol, nucleus, peroxisome	43.61	53.37
GSMUA_Achr4P16380_001	Banana	cytosol	50.88	53.28
TraesCS4A01G319100.1	Wheat	cytosol, peroxisome, plastid	45.36	49.59
VIT_04s0044g01650.t01	Wine grape	cytosol	46.62	49.34
TraesCS3A01G399800.1	Wheat	cytosol	44.11	49.16
GSMUA_Achr11P...	Banana	cytosol	46.12	48.81
KRH53918	Soybean	cytosol, nucleus, peroxisome	46.12	48.55
VIT_18s0001g01390.t01	Wine grape	cytosol	45.86	48.41
KRH64020	Soybean	cytosol	47.12	47.96
KRH53327	Soybean	cytosol	42.86	46.72
Bra014019.1-P	Field mustard	cytosol	41.6	46.5
KRH18058	Soybean	cytosol	43.61	46.4
KRH64596	Soybean	cytosol	43.86	46.3
KRH16465	Soybean	cytosol, nucleus, peroxisome	43.11	45.74
OQU78027	Sorghum	cytosol	56.89	45.58
AT1G44090.1	Thale cress	mitochondrion	43.11	44.68
Solyc11g013360.1.1	Tomato	cytosol	38.6	44.64
CDY71240	Canola	cytosol, peroxisome, plastid	29.57	44.19
VIT_04s0044g01520.t01	Wine grape	cytosol	39.1	41.6
CDY70184	Canola	cytosol	31.33	38.34
CDY36334	Canola	cytosol	9.77	31.97
TraesCS4A01G234100.1	Wheat	cytosol	27.57	31.61

Protein Annotations

EnsemblPlants:TraesCS1A01G263600.1	EnsemblPlantsGene:TraesCS1A01G263600	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF115	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SEG:seg	SUPFAM:SSF51197	MapMan:11.6.1.5	:	:

Description

No Description!

Coordinates

chr1A:+:459097243..459100300

Molecular Weight (calculated)

43728.6 Da

IEP (calculated)

6.562

GRAVY (calculated)

-0.277

Length

399 amino acids

Sequence
(BLAST)

001: MSFPAMEVAR SPHLPCVPVD ANATDSNSAT DVLDLWRQQK QIPAPFVWPH ADARPSSMLE LDVPVVDIGA ALHSAAGMGR AAAQVAEACA SHGFFQVTGH
101: GVDLALARAA LDGAADFFRL PLATKQRVRR SPGTVEGYAS AHADRFAAKL PWKETLSFSH NHDDVGARGN SHVVVDYFTS ALGDDFKHLG EVYQEYCEAM
201: EEASLAIMEV LGVSLGLGRG YYRDYFADGS STMRCNNYPR CPEPDRTLGT GPHCDPSALT ILLQDGDVDG LQVLVDGAWR FVRPKTGELV VNIGDTFMAL
301: SNGRYKSCLH RAVVHREKER RSLAYFLSPR EDRVVRPPPS PAPAPRLYPD FTWAELMRFT QRHYRADSRT LDAFARWLDP PSFSAAPLPH GPAQAQGTV

Best Arabidopsis Sequence Match ( AT1G44090.1 )
(BLAST)

001: MCIYASRQTV CPYLTPFKVK RPKSREMNSS DVNFSLLQSQ PNVPAEFFWP EKDVAPSEGD LDLPIIDLSG FLNGNEAETQ LAAKAVKKAC MAHGTFLVVN
101: HGFKSGLAEK ALEISSLFFG LSKDEKLRAY RIPGNISGYT AGHSQRFSSN LPWNETLTLA FKKGPPHVVE DFLTSRLGNH RQEIGQVFQE FCDAMNGLVM
201: DLMELLGISM GLKDRTYYRR FFEDGSGIFR CNYYPPCKQP EKALGVGPHN DPTAITVLLQ DDVVGLEVFA AGSWQTVRPR PGALVVNVGD TFMALSNGNY
301: RSCYHRAVVN KEKVRRSLVF FSCPREDKII VPPPELVEGE EASRKYPDFT WAQLQKFTQS GYRVDNTTLH NFSSWLVSNS DKKST

Arabidopsis Description

GA20OX5Gibberellin 20 oxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q4PT02]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.