Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G263600.1 | Wheat | cytosol | 68.63 | 70.18 |
| TraesCS1D01G263700.1 | Wheat | cytosol | 69.36 | 68.69 |
| TraesCS1B01G274200.1 | Wheat | cytosol | 68.63 | 67.96 |
| Os01t0883800-02 | Rice | cytosol | 63.48 | 66.58 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, plastid | 46.32 | 57.98 |
| GSMUA_Achr6P25910_001 | Banana | cytosol | 44.61 | 57.78 |
| GSMUA_Achr8P32560_001 | Banana | cytosol, nucleus, peroxisome | 44.61 | 55.83 |
| GSMUA_Achr4P16380_001 | Banana | cytosol | 51.96 | 55.64 |
| HORVU1Hr1G063780.4 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 54.9 | 53.85 |
| Os07t0169700-01 | Rice | plasma membrane | 45.1 | 50.14 |
| VIT_18s0001g01390.t01 | Wine grape | cytosol | 45.1 | 48.68 |
| GSMUA_Achr11P... | Banana | cytosol | 44.61 | 48.28 |
| Os03t0856700-02 | Rice | cytosol, mitochondrion | 42.89 | 47.04 |
| Bra014019.1-P | Field mustard | cytosol | 40.93 | 46.78 |
| KRH53918 | Soybean | cytosol, nucleus, peroxisome | 43.38 | 46.7 |
| KRH64020 | Soybean | cytosol | 44.61 | 46.43 |
| KRH18058 | Soybean | cytosol | 42.65 | 46.4 |
| VIT_04s0044g01650.t01 | Wine grape | cytosol | 42.65 | 46.15 |
| OQU78027 | Sorghum | cytosol | 55.88 | 45.78 |
| KRH16465 | Soybean | cytosol, nucleus, peroxisome | 42.16 | 45.74 |
| CDY71240 | Canola | cytosol, peroxisome, plastid | 29.9 | 45.69 |
| AT1G44090.1 | Thale cress | mitochondrion | 42.65 | 45.19 |
| KRH64596 | Soybean | cytosol | 41.42 | 44.71 |
| KRH53327 | Soybean | cytosol | 39.71 | 44.26 |
| Solyc11g013360.1.1 | Tomato | cytosol | 36.27 | 42.9 |
| VIT_04s0044g01520.t01 | Wine grape | cytosol | 36.52 | 39.73 |
| CDY70184 | Canola | cytosol | 31.62 | 39.57 |
| CDY36334 | Canola | cytosol | 9.8 | 32.79 |
| Os03t0618300-01 | Rice | cytosol | 25.74 | 29.83 |
| Os08t0249900-00 | Rice | cytosol, nucleus, peroxisome | 15.44 | 23.6 |
Protein Annotations
| MapMan:11.6.1.5 | Gene3D:2.60.120.330 | ProteinID:AAT44252.1 | ProteinID:BAS94085.1 | InterPro:DIOX_N | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009685 |
| GO:GO:0009987 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | EnsemblPlantsGene:Os05g0421900 | EnsemblPlants:Os05t0421900-00 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 |
| PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF115 | UniProt:Q6L4Y3 | SUPFAM:SSF51197 | UniParc:UPI00003A9264 |
| SEG:seg | : | : | : | : | : |
Description
GIBBERELLIN 20-OXIDASE 4GA 20-oxidase4, GA metabolism (Os05t0421900-00)
Coordinates
chr5:-:20685488..20692048
Molecular Weight (calculated)
43757.8 Da
IEP (calculated)
7.261
GRAVY (calculated)
-0.151
Length
408 amino acids
Sequence
(BLAST)
(BLAST)
001: MVYISNAQDA SKLIVTAKGG GGEADDAAAS SAAVVLDLWR QPAKIPAPFV WPRADVALPP SSPPTGELDV PVVDLAAALR DAAGMRRAVA QVAAACASHG
101: FFQVSGHGVP PSLARAALDG AAGFFRLPPA AKQRARRAPG TVTGYTAAHA DRFVDNLPWK ETLSFGHRHA NAAGNNSSTV ADYFSTLGDD FKHLGEVYQE
201: YCEAMEEVTK AIMAVLGESL GVGGGYYREF FEDSSSIMRC NYYPPCPEPE RTLGTGPHCD PSALTVLLQD GDVDGLQVLV AGAWRPVRPL PGAFVVNIGD
301: TFMALTNGRY KSCLHRAVVH REQERRSLAF FLCPREDRVV RPPAGAGAGE RRLYPDFTWA DFMRFTQRHY RADTRTLDAF ARWLRPPACS GAAPVVGPPT
401: TATQAATV
101: FFQVSGHGVP PSLARAALDG AAGFFRLPPA AKQRARRAPG TVTGYTAAHA DRFVDNLPWK ETLSFGHRHA NAAGNNSSTV ADYFSTLGDD FKHLGEVYQE
201: YCEAMEEVTK AIMAVLGESL GVGGGYYREF FEDSSSIMRC NYYPPCPEPE RTLGTGPHCD PSALTVLLQD GDVDGLQVLV AGAWRPVRPL PGAFVVNIGD
301: TFMALTNGRY KSCLHRAVVH REQERRSLAF FLCPREDRVV RPPAGAGAGE RRLYPDFTWA DFMRFTQRHY RADTRTLDAF ARWLRPPACS GAAPVVGPPT
401: TATQAATV
001: MAILCTTTSP AEKEHEPKQD LEKDQTSPLI FNPSLLNLQS QIPNQFIWPD EEKPSIDIPE LNVPFIDLSS QDSTLEAPRV IAEACTKHGF FLVVNHGVSE
101: SLIADAHRLM ESFFDMPLAG KQKAQRKPGE SCGYASSFTG RFSTKLPWKE TLSFQFSNDN SGSRTVQDYF SDTLGQEFEQ FGKVYQDYCE AMSSLSLKIM
201: ELLGLSLGVN RDYFRGFFEE NDSIMRLNHY PPCQTPDLTL GTGPHCDPSS LTILHQDHVN GLQVFVDNQW QSIRPNPKAF VVNIGDTFMA LSNGIFKSCL
301: HRAVVNRESA RKSMAFFLCP KKDKVVKPPS DILEKMKTRK YPDFTWSMFL EFTQKHYRAD VNTLDSFSNW VITNNNPI
101: SLIADAHRLM ESFFDMPLAG KQKAQRKPGE SCGYASSFTG RFSTKLPWKE TLSFQFSNDN SGSRTVQDYF SDTLGQEFEQ FGKVYQDYCE AMSSLSLKIM
201: ELLGLSLGVN RDYFRGFFEE NDSIMRLNHY PPCQTPDLTL GTGPHCDPSS LTILHQDHVN GLQVFVDNQW QSIRPNPKAF VVNIGDTFMA LSNGIFKSCL
301: HRAVVNRESA RKSMAFFLCP KKDKVVKPPS DILEKMKTRK YPDFTWSMFL EFTQKHYRAD VNTLDSFSNW VITNNNPI
Arabidopsis Description
GA20OX2Gibberellin 20 oxidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39111]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.