Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36334 | Canola | cytosol | 39.7 | 86.89 |
| CDY70184 | Canola | cytosol | 97.38 | 79.75 |
| AT1G44090.1 | Thale cress | mitochondrion | 86.14 | 59.74 |
| GSMUA_Achr6P25910_001 | Banana | cytosol | 46.82 | 39.68 |
| GSMUA_Achr8P32560_001 | Banana | cytosol, nucleus, peroxisome | 47.57 | 38.96 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, plastid | 44.94 | 36.81 |
| CDY64866 | Canola | cytosol, nucleus, peroxisome | 42.7 | 36.77 |
| GSMUA_Achr11P... | Banana | cytosol | 50.19 | 35.54 |
| GSMUA_Achr4P16380_001 | Banana | cytosol | 50.56 | 35.43 |
| CDY13227 | Canola | cytosol | 22.47 | 35.09 |
| CDX81038 | Canola | cytosol, nucleus, peroxisome | 48.69 | 34.39 |
| VIT_18s0001g01390.t01 | Wine grape | cytosol | 48.31 | 34.13 |
| CDY58871 | Canola | cytosol, endoplasmic reticulum, peroxisome | 47.94 | 33.86 |
| CDX70015 | Canola | cytosol, nucleus, peroxisome | 47.19 | 33.25 |
| CDY05017 | Canola | cytosol, nucleus, peroxisome | 47.19 | 33.25 |
| Zm00001d042611_P001 | Maize | cytosol | 47.94 | 33.16 |
| CDX98998 | Canola | cytosol, nucleus, peroxisome | 46.82 | 32.98 |
| CDY14054 | Canola | cytosol, nucleus, peroxisome | 46.82 | 32.98 |
| KRH18058 | Soybean | cytosol | 46.07 | 32.8 |
| VIT_04s0044g01650.t01 | Wine grape | cytosol | 46.07 | 32.63 |
| KRH64020 | Soybean | cytosol | 47.57 | 32.4 |
| CDY49714 | Canola | cytosol, nucleus, peroxisome | 42.32 | 32.29 |
| KRH16465 | Soybean | cytosol, nucleus, peroxisome | 45.32 | 32.18 |
| CDY52529 | Canola | cytosol, nucleus, peroxisome | 45.69 | 32.02 |
| CDY00263 | Canola | cytosol, nucleus, peroxisome | 33.33 | 31.9 |
| Os01t0883800-02 | Rice | cytosol | 46.44 | 31.88 |
| KRH53918 | Soybean | cytosol, nucleus, peroxisome | 44.94 | 31.66 |
| KRH53327 | Soybean | cytosol | 42.7 | 31.15 |
| Solyc11g013360.1.1 | Tomato | cytosol | 40.07 | 31.01 |
| CDY44829 | Canola | cytosol | 45.32 | 30.95 |
| CDY72226 | Canola | mitochondrion | 29.96 | 30.89 |
| KRH64596 | Soybean | cytosol | 43.45 | 30.69 |
| CDX92707 | Canola | cytosol, nucleus, peroxisome | 43.82 | 30.55 |
| CDY27101 | Canola | cytosol, nucleus, peroxisome | 43.07 | 30.5 |
| CDY64867 | Canola | cytosol | 42.7 | 30.48 |
| VIT_04s0044g01520.t01 | Wine grape | cytosol | 42.7 | 30.4 |
| CDX99892 | Canola | cytosol, nucleus, peroxisome | 43.07 | 30.34 |
| CDX99893 | Canola | cytosol, nucleus, peroxisome | 43.07 | 30.26 |
| CDY00499 | Canola | cytosol, nucleus, peroxisome | 43.07 | 30.26 |
| HORVU3Hr1G090980.3 | Barley | plastid | 46.82 | 30.19 |
| CDX91609 | Canola | cytosol, nucleus, peroxisome | 42.7 | 30.16 |
| CDX94446 | Canola | cytosol, nucleus, peroxisome | 42.32 | 30.05 |
| CDY55723 | Canola | cytosol, nucleus, peroxisome | 42.32 | 30.05 |
| Os05t0421900-00 | Rice | cytosol | 45.69 | 29.9 |
| TraesCS1A01G263600.1 | Wheat | cytosol | 44.19 | 29.57 |
| TraesCS3B01G439900.1 | Wheat | plastid | 46.44 | 29.45 |
| TraesCS1D01G263700.1 | Wheat | cytosol | 45.32 | 29.37 |
| CDY12880 | Canola | cytosol, nucleus, vacuole | 46.44 | 29.31 |
| TraesCS1B01G274200.1 | Wheat | cytosol | 44.57 | 28.88 |
| TraesCS3D01G401400.1 | Wheat | plastid | 46.82 | 28.67 |
| HORVU1Hr1G063780.4 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 44.57 | 28.61 |
| OQU87995 | Sorghum | plastid | 47.19 | 28.51 |
| TraesCS3A01G406200.1 | Wheat | plastid | 47.19 | 28.51 |
| CDY60083 | Canola | vacuole | 42.7 | 28.36 |
| Zm00001d012212_P001 | Maize | plastid | 46.44 | 26.78 |
| OQU78027 | Sorghum | cytosol | 47.19 | 25.3 |
| CDY22995 | Canola | cytosol | 29.21 | 22.1 |
| CDY22994 | Canola | cytosol | 29.21 | 22.1 |
| CDX82318 | Canola | cytosol | 29.21 | 22.1 |
| CDX82317 | Canola | cytosol | 29.21 | 22.1 |
| CDX92296 | Canola | cytosol, nucleus, peroxisome | 28.84 | 22.06 |
| CDX99288 | Canola | cytosol | 28.84 | 21.88 |
| CDX92294 | Canola | cytosol | 28.84 | 21.88 |
| CDX99287 | Canola | cytoskeleton, cytosol, peroxisome | 28.46 | 21.84 |
| CDY69351 | Canola | cytosol, peroxisome | 16.48 | 19.47 |
| CDY13228 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:11.6.1.5 | Gene3D:2.60.120.330 | GO:A0A078JXT1 | UniProt:A0A078JXT1 | EnsemblPlants:CDY71240 | ProteinID:CDY71240 |
| ProteinID:CDY71240.1 | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00013490001 | InterPro:IPNS-like |
| InterPro:IPR005123 | InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PFscan:PS51471 |
| PANTHER:PTHR10209 | PANTHER:PTHR10209:SF368 | SUPFAM:SSF51197 | UniParc:UPI0004EDE5D3 | SEG:seg | : |
Description
BnaCnng72000DBnaCnng72000D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JXT1]
Coordinates
chrLK045056:+:944..1870
Molecular Weight (calculated)
29742.5 Da
IEP (calculated)
5.962
GRAVY (calculated)
-0.290
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSSNVNFSL LQSQPNIPPE FFWPENDLTP SEGDLNLPII DMSGFLNGDE AETQRAAKAV REACMTHGAF LVINHGFKSG LAEKALHISS LFFGLPKDEK
101: LKAYRTPGNI SGYTAGHSHR FSSNLPWNET LTVAFKKGPP QVVEDFLTSK LGDRRQEIGQ VFQEFSEAMN RLNLELMELL GISMGLKDRT FFRRFFEDGN
201: AIFRCNYYPP CKQPEKALGV GPHNDPTAIT VLLQDDVVGL EVFASGKWQT VRPRPGALVV NVGDTFM
101: LKAYRTPGNI SGYTAGHSHR FSSNLPWNET LTVAFKKGPP QVVEDFLTSK LGDRRQEIGQ VFQEFSEAMN RLNLELMELL GISMGLKDRT FFRRFFEDGN
201: AIFRCNYYPP CKQPEKALGV GPHNDPTAIT VLLQDDVVGL EVFASGKWQT VRPRPGALVV NVGDTFM
001: MCIYASRQTV CPYLTPFKVK RPKSREMNSS DVNFSLLQSQ PNVPAEFFWP EKDVAPSEGD LDLPIIDLSG FLNGNEAETQ LAAKAVKKAC MAHGTFLVVN
101: HGFKSGLAEK ALEISSLFFG LSKDEKLRAY RIPGNISGYT AGHSQRFSSN LPWNETLTLA FKKGPPHVVE DFLTSRLGNH RQEIGQVFQE FCDAMNGLVM
201: DLMELLGISM GLKDRTYYRR FFEDGSGIFR CNYYPPCKQP EKALGVGPHN DPTAITVLLQ DDVVGLEVFA AGSWQTVRPR PGALVVNVGD TFMALSNGNY
301: RSCYHRAVVN KEKVRRSLVF FSCPREDKII VPPPELVEGE EASRKYPDFT WAQLQKFTQS GYRVDNTTLH NFSSWLVSNS DKKST
101: HGFKSGLAEK ALEISSLFFG LSKDEKLRAY RIPGNISGYT AGHSQRFSSN LPWNETLTLA FKKGPPHVVE DFLTSRLGNH RQEIGQVFQE FCDAMNGLVM
201: DLMELLGISM GLKDRTYYRR FFEDGSGIFR CNYYPPCKQP EKALGVGPHN DPTAITVLLQ DDVVGLEVFA AGSWQTVRPR PGALVVNVGD TFMALSNGNY
301: RSCYHRAVVN KEKVRRSLVF FSCPREDKII VPPPELVEGE EASRKYPDFT WAQLQKFTQS GYRVDNTTLH NFSSWLVSNS DKKST
Arabidopsis Description
GA20OX5Gibberellin 20 oxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q4PT02]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.