Factsheet for TraesCS3B01G439900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
peroxisome 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	peroxisome, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G090980.3	Barley	plastid	93.82	95.41
TraesCS3D01G401400.1	Wheat	plastid	95.96	92.66
TraesCS3A01G406200.1	Wheat	plastid	95.01	90.5
Zm00001d042611_P001	Maize	cytosol	75.53	82.38
Os01t0883800-02	Rice	cytosol	74.35	80.46
OQU87995	Sorghum	plastid	77.67	73.98
Zm00001d012212_P001	Maize	plastid	75.77	68.9
TraesCS1B01G274200.1	Wheat	cytosol	61.52	62.86
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	47.03	60.74
GSMUA_Achr6P25910_001	Banana	cytosol	45.37	60.63
GSMUA_Achr4P16380_001	Banana	cytosol	54.63	60.37
GSMUA_Achr8P32560_001	Banana	cytosol, nucleus, peroxisome	46.56	60.12
VIT_18s0001g01390.t01	Wine grape	cytosol	47.98	53.44
TraesCS5B01G560300.1	Wheat	cytosol, peroxisome, plastid	45.13	51.77
GSMUA_Achr11P...	Banana	cytosol	46.32	51.72
KRH64020	Soybean	cytosol	47.98	51.53
KRH53918	Soybean	cytosol, nucleus, peroxisome	46.32	51.45
KRH16465	Soybean	cytosol, nucleus, peroxisome	45.13	50.53
KRH18058	Soybean	cytosol	44.89	50.4
TraesCS3B01G432800.1	Wheat	cytosol	42.76	50.0
VIT_04s0044g01650.t01	Wine grape	cytosol	44.66	49.87
KRH53327	Soybean	cytosol	42.76	49.18
Bra014019.1-P	Field mustard	cytosol	40.86	48.18
KRH64596	Soybean	cytosol	42.76	47.62
Solyc11g013360.1.1	Tomato	cytosol	38.95	47.54
CDY71240	Canola	cytosol, peroxisome, plastid	29.45	46.44
AT1G44090.1	Thale cress	mitochondrion	41.57	45.45
VIT_04s0044g01520.t01	Wine grape	cytosol	38.24	42.93
CDY70184	Canola	cytosol	31.12	40.18
CDY36334	Canola	cytosol	9.5	32.79
TraesCS4B01G081200.1	Wheat	cytosol	25.18	30.46

Protein Annotations

EnsemblPlants:TraesCS3B01G439900.1	EnsemblPlantsGene:TraesCS3B01G439900	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF129	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	PRINTS:PR00682	SEG:seg	SUPFAM:SSF51197	MapMan:11.6.1.5	:

Description

No Description!

Coordinates

chr3B:-:679203881..679206779

Molecular Weight (calculated)

46168.9 Da

IEP (calculated)

8.314

GRAVY (calculated)

-0.270

Length

421 amino acids

Sequence
(BLAST)

001: MVLQTAQQEP SLTRPPHCSV ASARSPAAMD TSPTTPLLLQ PPAPSIDPFA AKAAVNKNGG AATAVYDLRR EPKIPAPFVW PHAEVRPTTA EELAMPVVDV
101: SVLRNGDAAG LRRAVAQVAA ACATHGFFQV SGHGVDDTLA RAALDGACGF FRLPLAEKQR ARRIPGTVSG YTSAHADRFA SKLPWKETLS FGFHDRAGAA
201: PVVVDYFTST LGPDYEPMGR VYQEYCGKMK ELSLTIMELL ELSLGVEKRG YYREFFADSS SIMRCNYYPP CPEPERTLGT GPHCDPTALT ILLQDDVGGL
301: EVLVDGDWRP VRPVPGAMVI NIGDTFMALS NGRYKSCLHR AVVNRRQERR SLAFFLCPRE ARVVRPPPGL RSPRQYPDFT WADLMRFTQR HYRADTRTLD
401: AFTQWFSSSS SSSSSSAQEA A

Best Arabidopsis Sequence Match ( AT1G44090.1 )
(BLAST)

001: MCIYASRQTV CPYLTPFKVK RPKSREMNSS DVNFSLLQSQ PNVPAEFFWP EKDVAPSEGD LDLPIIDLSG FLNGNEAETQ LAAKAVKKAC MAHGTFLVVN
101: HGFKSGLAEK ALEISSLFFG LSKDEKLRAY RIPGNISGYT AGHSQRFSSN LPWNETLTLA FKKGPPHVVE DFLTSRLGNH RQEIGQVFQE FCDAMNGLVM
201: DLMELLGISM GLKDRTYYRR FFEDGSGIFR CNYYPPCKQP EKALGVGPHN DPTAITVLLQ DDVVGLEVFA AGSWQTVRPR PGALVVNVGD TFMALSNGNY
301: RSCYHRAVVN KEKVRRSLVF FSCPREDKII VPPPELVEGE EASRKYPDFT WAQLQKFTQS GYRVDNTTLH NFSSWLVSNS DKKST

Arabidopsis Description

GA20OX5Gibberellin 20 oxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q4PT02]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.