Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P25910_001 | Banana | cytosol | 61.27 | 73.33 |
| GSMUA_Achr8P32560_001 | Banana | cytosol, nucleus, peroxisome | 55.17 | 63.8 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, plastid | 51.46 | 59.51 |
| GSMUA_Achr4P16380_001 | Banana | cytosol | 58.62 | 58.01 |
| GSMUA_Achr8P19120_001 | Banana | cytosol, extracellular, peroxisome | 45.09 | 55.19 |
| GSMUA_Achr2P01010_001 | Banana | cytosol, peroxisome, plastid | 44.03 | 53.04 |
| Zm00001d042611_P001 | Maize | cytosol | 52.25 | 51.04 |
| CDY71240 | Canola | cytosol, peroxisome, plastid | 35.54 | 50.19 |
| GSMUA_AchrUn_... | Banana | cytosol | 42.97 | 50.15 |
| Os01t0883800-02 | Rice | cytosol | 51.19 | 49.61 |
| HORVU3Hr1G090980.3 | Barley | plastid | 51.99 | 47.34 |
| TraesCS3B01G439900.1 | Wheat | plastid | 51.72 | 46.32 |
| TraesCS1A01G263600.1 | Wheat | cytosol | 48.81 | 46.12 |
| Bra014019.1-P | Field mustard | cytosol | 43.5 | 45.94 |
| TraesCS1B01G274200.1 | Wheat | cytosol | 49.6 | 45.39 |
| OQU87995 | Sorghum | plastid | 52.79 | 45.02 |
| TraesCS3D01G401400.1 | Wheat | plastid | 51.99 | 44.95 |
| TraesCS1D01G263700.1 | Wheat | cytosol | 49.07 | 44.9 |
| Os05t0421900-00 | Rice | cytosol | 48.28 | 44.61 |
| TraesCS3A01G406200.1 | Wheat | plastid | 51.99 | 44.34 |
| AT1G44090.1 | Thale cress | mitochondrion | 43.77 | 42.86 |
| Zm00001d012212_P001 | Maize | plastid | 52.52 | 42.76 |
| CDY70184 | Canola | cytosol | 36.87 | 42.64 |
| CDY36334 | Canola | cytosol | 12.73 | 39.34 |
| HORVU1Hr1G063780.4 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 42.97 | 38.94 |
| OQU78027 | Sorghum | cytosol | 42.44 | 32.13 |
| GSMUA_Achr7P08240_001 | Banana | cytosol | 21.49 | 25.8 |
| GSMUA_Achr7P08230_001 | Banana | cytosol | 20.95 | 24.46 |
Protein Annotations
| MapMan:11.6.1.5 | Gene3D:2.60.120.330 | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | EnsemblPlantsGene:GSMUA_Achr11G11840_001 |
| EnsemblPlants:GSMUA_Achr11P11840_001 | EnsemblPlants:GSMUA_Achr11T11840_001 | InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | UniProt:M0RRG4 |
| InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PRINTS:PR00682 | PFscan:PS51471 | PANTHER:PTHR10209 |
| PANTHER:PTHR10209:SF129 | SUPFAM:SSF51197 | UniParc:UPI000294AB6C | SEG:seg | : | : |
Description
Gibberellin 20 oxidase 2 [Source:GMGC_GENE;Acc:GSMUA_Achr11G11840_001]
Coordinates
chr11:-:10722740..10724748
Molecular Weight (calculated)
42263.3 Da
IEP (calculated)
8.617
GRAVY (calculated)
-0.323
Length
377 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSSPATLDL DKGKSDCGNS VVVFDPSVLQ KQSNIPEAFI WPRCERPHQP EELEVPVVDL KGFLEGDAAS TSRTAAAIRG ACASHGFFQV MNHKVDAAAL
101: HDALRVADEF FELPLSTKLR ARRRPGCTWG YVGAHADRFA SMLPWKETLS FAYDYSGNRD GVVDYITSKL GEEFQPMGRV HRRYCAAMKD LSLSIMELLG
201: ISLRMGRDYY RNFFEDGSSI MRCNNYPPCQ EPELTLGTGP HSDPTALTIL HQDQVAGLQV FAEGKWRSVS PIAGALVINI GDTFMALTNG RYKSCLHRAV
301: VNRDRRRRSL AFFVCPQADK VSHYRTDAST LQNFTQRFLT YSIHLSLSSN NNSNNKAIKS HLNRLSSRYI KIHIFIS
101: HDALRVADEF FELPLSTKLR ARRRPGCTWG YVGAHADRFA SMLPWKETLS FAYDYSGNRD GVVDYITSKL GEEFQPMGRV HRRYCAAMKD LSLSIMELLG
201: ISLRMGRDYY RNFFEDGSSI MRCNNYPPCQ EPELTLGTGP HSDPTALTIL HQDQVAGLQV FAEGKWRSVS PIAGALVINI GDTFMALTNG RYKSCLHRAV
301: VNRDRRRRSL AFFVCPQADK VSHYRTDAST LQNFTQRFLT YSIHLSLSSN NNSNNKAIKS HLNRLSSRYI KIHIFIS
001: MATECIATVP QIFSENKTKE DSSIFDAKLL NQHSHHIPQQ FVWPDHEKPS TDVQPLQVPL IDLAGFLSGD SCLASEATRL VSKAATKHGF FLITNHGVDE
101: SLLSRAYLHM DSFFKAPACE KQKAQRKWGE SSGYASSFVG RFSSKLPWKE TLSFKFSPEE KIHSQTVKDF VSKKMGDGYE DFGKVYQEYA EAMNTLSLKI
201: MELLGMSLGV ERRYFKEFFE DSDSIFRLNY YPQCKQPELA LGTGPHCDPT SLTILHQDQV GGLQVFVDNK WQSIPPNPHA FVVNIGDTFM ALTNGRYKSC
301: LHRAVVNSER ERKTFAFFLC PKGEKVVKPP EELVNGVKSG ERKYPDFTWS MFLEFTQKHY RADMNTLDEF SIWLKNRRSF
101: SLLSRAYLHM DSFFKAPACE KQKAQRKWGE SSGYASSFVG RFSSKLPWKE TLSFKFSPEE KIHSQTVKDF VSKKMGDGYE DFGKVYQEYA EAMNTLSLKI
201: MELLGMSLGV ERRYFKEFFE DSDSIFRLNY YPQCKQPELA LGTGPHCDPT SLTILHQDQV GGLQVFVDNK WQSIPPNPHA FVVNIGDTFM ALTNGRYKSC
301: LHRAVVNSER ERKTFAFFLC PKGEKVVKPP EELVNGVKSG ERKYPDFTWS MFLEFTQKHY RADMNTLDEF SIWLKNRRSF
Arabidopsis Description
GA20OX3Gibberellin 20 oxidase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q39112]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.