Factsheet for HORVU1Hr1G063780.4

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, secretory
Any Predictor:	peroxisome, secretory
MultiLoc:	peroxisome
TargetP:	secretory
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G274200.1	Wheat	cytosol	73.08	73.79
TraesCS1A01G263600.1	Wheat	cytosol	70.19	73.18
TraesCS1D01G263700.1	Wheat	cytosol	71.63	72.33
Os05t0421900-00	Rice	cytosol	53.85	54.9
HORVU3Hr1G090980.3	Barley	plastid	51.2	51.45
GSMUA_Achr6P25910_001	Banana	cytosol	35.58	46.98
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	36.06	46.01
CDY71240	Canola	cytosol, peroxisome, plastid	28.61	44.57
GSMUA_Achr8P32560_001	Banana	cytosol, nucleus, peroxisome	34.86	44.48
OQU78027	Sorghum	cytosol	51.44	42.97
GSMUA_Achr11P...	Banana	cytosol	38.94	42.97
GSMUA_Achr4P16380_001	Banana	cytosol	39.18	42.78
HORVU5Hr1G124120.1	Barley	cytosol	36.06	41.67
VIT_04s0044g01650.t01	Wine grape	cytosol	36.06	39.79
HORVU3Hr1G089980.2	Barley	cytosol	33.89	39.5
VIT_18s0001g01390.t01	Wine grape	cytosol	35.82	39.42
KRH53918	Soybean	cytosol, nucleus, peroxisome	35.82	39.31
KRH64020	Soybean	cytosol	37.02	39.29
CDY70184	Canola	cytosol	29.09	37.12
Solyc11g013360.1.1	Tomato	cytosol	30.77	37.1
Bra014019.1-P	Field mustard	cytosol	31.25	36.41
KRH53327	Soybean	cytosol	31.01	35.25
KRH18058	Soybean	cytosol	31.25	34.67
VIT_04s0044g01520.t01	Wine grape	cytosol	31.25	34.67
KRH64596	Soybean	cytosol	31.49	34.66
KRH16465	Soybean	cytosol, nucleus, peroxisome	31.25	34.57
AT1G44090.1	Thale cress	mitochondrion	31.97	34.55
CDY36334	Canola	cytosol	9.38	31.97
HORVU4Hr1G013840.1	Barley	cytosol	20.91	22.6

Protein Annotations

MapMan:11.6.1.5	Gene3D:2.60.120.330	UniProt:A0A287FYM8	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
EnsemblPlantsGene:HORVU1Hr1G063780	EnsemblPlants:HORVU1Hr1G063780.4	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF115	SUPFAM:SSF51197
UniParc:UPI000B461DE0	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:457146346..457149143

Molecular Weight (calculated)

44042.5 Da

IEP (calculated)

6.868

GRAVY (calculated)

-0.076

Length

416 amino acids

Sequence
(BLAST)

001: FLVFAMVDVS NFVEANGNAA VSIPAMEVAG SPHVPFVPRD ANATDSKNAK DVLDLWRQQK QIPAPFIWPH ADARPSSILE LDVPVVDIGA ALHSAAGMAR
101: AAAQVAEACA SHGFFQVTGH GVDPALAQAA LDGAADFFRL PLATKQRARR SPGTVKGYAS AHADRFAAKL PWKETLSFIH NHVHEDVGAR ASSHVVDYFT
201: SALGDDFMHL GEVYQEYCEA MEDASLAIME VLGVSLGLGR GYYRDFFADG SSIMRCNYYP RCPEPDRTLG TGPHCDPSAL TILLQDGEVD GLQVLVDGAW
301: RSVRPKPGEL VVNIGDTFMV RAVERPVQEL PPPRGGAPGE GAPVAGLLPR PAGGPGGSPA AFAGAGAAAL PGLHLGGAHA IHAAPLPRRR PHARRLRVLA
401: RPAQLPRHAP GPRDCL

Best Arabidopsis Sequence Match ( AT4G25420.1 )
(BLAST)

001: MAVSFVTTSP EEEDKPKLGL GNIQTPLIFN PSMLNLQANI PNQFIWPDDE KPSINVLELD VPLIDLQNLL SDPSSTLDAS RLISEACKKH GFFLVVNHGI
101: SEELISDAHE YTSRFFDMPL SEKQRVLRKS GESVGYASSF TGRFSTKLPW KETLSFRFCD DMSRSKSVQD YFCDALGHGF QPFGKVYQEY CEAMSSLSLK
201: IMELLGLSLG VKRDYFREFF EENDSIMRLN YYPPCIKPDL TLGTGPHCDP TSLTILHQDH VNGLQVFVEN QWRSIRPNPK AFVVNIGDTF MALSNDRYKS
301: CLHRAVVNSE SERKSLAFFL CPKKDRVVTP PRELLDSITS RRYPDFTWSM FLEFTQKHYR ADMNTLQAFS DWLTKPI

Arabidopsis Description

GA20OX1Gibberellin 20 oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39110]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.