CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH18058	Soybean	cytosol	92.82	93.07
KRH53327	Soybean	cytosol	69.95	71.86
KRH64596	Soybean	cytosol	70.74	70.37
VIT_18s0001g01390.t01	Wine grape	cytosol	63.3	62.96
GSMUA_Achr8P32560_001	Banana	cytosol, nucleus, peroxisome	48.67	56.13
GSMUA_Achr4P16380_001	Banana	cytosol	56.38	55.64
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	48.14	55.52
KRH53918	Soybean	cytosol, nucleus, peroxisome	53.46	53.03
KRH64020	Soybean	cytosol	55.05	52.81
KRH38652	Soybean	cytosol	52.13	51.31
Solyc11g013360.1.1	Tomato	cytosol	46.54	50.72
KRG91415	Soybean	cytosol	50.27	49.35
Zm00001d042611_P001	Maize	cytosol	50.27	48.96
Os01t0883800-02	Rice	cytosol	50.0	48.33
KRH35405	Soybean	cytosol	46.54	47.95
KRH65199	Soybean	cytosol	47.87	47.12
Bra014019.1-P	Field mustard	cytosol	44.68	47.06
KRH09174	Soybean	cytosol	37.77	46.71
KRH48309	Soybean	cytosol	48.14	45.71
HORVU3Hr1G090980.3	Barley	plastid	50.0	45.41
CDY71240	Canola	cytosol, peroxisome, plastid	32.18	45.32
TraesCS3B01G439900.1	Wheat	plastid	50.53	45.13
AT1G44090.1	Thale cress	mitochondrion	44.95	43.9
TraesCS3D01G401400.1	Wheat	plastid	50.0	43.12
TraesCS1A01G263600.1	Wheat	cytosol	45.74	43.11
TraesCS3A01G406200.1	Wheat	plastid	50.53	42.99
OQU87995	Sorghum	plastid	50.53	42.99
Os05t0421900-00	Rice	cytosol	45.74	42.16
TraesCS1D01G263700.1	Wheat	cytosol	46.01	41.99
TraesCS1B01G274200.1	Wheat	cytosol	46.01	41.99
Zm00001d012212_P001	Maize	plastid	49.73	40.39
CDY70184	Canola	cytosol	34.57	39.88
CDY36334	Canola	cytosol	10.9	33.61
KRH50227	Soybean	cytoskeleton, cytosol, peroxisome	21.54	32.93
KRH50228	Soybean	cytosol	29.79	31.82
KRH71196	Soybean	cytosol	29.52	31.53
HORVU1Hr1G063780.4	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	34.57	31.25
KRH50226	Soybean	cytosol	28.46	30.31
KRH71198	Soybean	cytosol	28.19	30.11
KRH71199	Soybean	cytosol	27.93	29.83
KRH71201	Soybean	cytosol	27.66	29.55
OQU78027	Sorghum	cytosol	38.83	29.32
KRH49793	Soybean	cytosol	26.6	29.15
KRG89226	Soybean	cytosol	27.93	28.85
KRH71195	Soybean	cytosol	26.6	27.93
KRH49792	Soybean	nucleus	21.01	27.53

Protein Annotations

EntrezGene:100787976	MapMan:11.6.1.5	Gene3D:2.60.120.330	UniProt:A0A0R0GDJ8	EMBL:ACUP02008895	InterPro:DIOX_N
EnsemblPlantsGene:GLYMA_14G157400	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443
EnsemblPlants:KRH16465	ProteinID:KRH16465	ProteinID:KRH16465.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF129	SUPFAM:SSF51197	UniParc:UPI000233AB47
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr14:+:34740667..34744010

Molecular Weight (calculated)

42750.9 Da

IEP (calculated)

6.577

GRAVY (calculated)

-0.316

Length

376 amino acids

Sequence
(BLAST)

001: MDSGFCLVSS PNHQEVVQSR FFDPSWLQMQ PHVPMSFVWP KECLVNANEE FHAPMVDLGG FLRGDDDDAT NRAVRLVRKA CSSHGFFQVI NHGVDPLLIG
101: EAYDQMDAFF KLPIRRKVSV KKTLGSVWGY SGAHADRFSS KLPWKETLSF PFHDNNELEP PVVTSFFNDT LGGDFEQAGV VFQKYCETMK QLGIKLLELL
201: AISLGVDKLH YNYLFEEGCS VMRCNYYPSC QQPSLALGTG PHCDPTSLTI LHQDQVGGLD VFADNTWQTV PPRPDALVIN IGDTFMALSN GRYKSCLHRA
301: VVNKYKERRS LAFFLCPKED KVVSAPEDIV RRDGTKQYPD FTWSRLLEFT QKYYRADEAT LQNFTKWLLS SKQQTL

Best Arabidopsis Sequence Match ( AT1G44090.1 )
(BLAST)

001: MCIYASRQTV CPYLTPFKVK RPKSREMNSS DVNFSLLQSQ PNVPAEFFWP EKDVAPSEGD LDLPIIDLSG FLNGNEAETQ LAAKAVKKAC MAHGTFLVVN
101: HGFKSGLAEK ALEISSLFFG LSKDEKLRAY RIPGNISGYT AGHSQRFSSN LPWNETLTLA FKKGPPHVVE DFLTSRLGNH RQEIGQVFQE FCDAMNGLVM
201: DLMELLGISM GLKDRTYYRR FFEDGSGIFR CNYYPPCKQP EKALGVGPHN DPTAITVLLQ DDVVGLEVFA AGSWQTVRPR PGALVVNVGD TFMALSNGNY
301: RSCYHRAVVN KEKVRRSLVF FSCPREDKII VPPPELVEGE EASRKYPDFT WAQLQKFTQS GYRVDNTTLH NFSSWLVSNS DKKST

Arabidopsis Description

GA20OX5Gibberellin 20 oxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q4PT02]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.