CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71201	Soybean	cytosol	87.5	87.5
KRH71196	Soybean	cytosol	86.65	86.65
KRH50228	Soybean	cytosol	84.94	84.94
KRH71198	Soybean	cytosol	82.67	82.67
KRH50226	Soybean	cytosol	80.11	79.89
KRH50227	Soybean	cytoskeleton, cytosol, peroxisome	53.41	76.42
VIT_03s0063g01220.t01	Wine grape	cytosol	18.47	68.42
KRH71195	Soybean	cytosol	63.07	62.01
KRH49792	Soybean	nucleus	48.58	59.58
KRH49793	Soybean	cytosol	57.95	59.48
KRG89226	Soybean	cytosol	58.81	56.87
KRH65199	Soybean	cytosol	31.25	28.8
KRH53327	Soybean	cytosol	29.83	28.69
KRH38652	Soybean	cytosol	30.4	28.01
KRH16465	Soybean	cytosol, nucleus, peroxisome	29.83	27.93
KRH48309	Soybean	cytosol	31.25	27.78
KRH35405	Soybean	cytosol	28.69	27.67
KRH09174	Soybean	cytosol	23.86	27.63
KRH18058	Soybean	cytosol	29.26	27.47
KRG91415	Soybean	cytosol	29.55	27.15
KRH64596	Soybean	cytosol	28.98	26.98
KRH64020	Soybean	cytosol	28.98	26.02
KRH53918	Soybean	cytosol, nucleus, peroxisome	27.84	25.86
Solyc09g018420.1.1	Tomato	cytosol	7.1	24.04
Solyc09g042210.1.1	Tomato	cytosol, mitochondrion, nucleus, peroxisome	8.81	23.85

Protein Annotations

EntrezGene:100809985	Gene3D:2.60.120.330	MapMan:50.1.13	EMBL:ACUP02000880	EMBL:BT094056	UniProt:C6T994
InterPro:DIOX_N	EnsemblPlantsGene:GLYMA_02G136200	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	EnsemblPlants:KRH71199	ProteinID:KRH71199	ProteinID:KRH71199.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171
PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF98	SUPFAM:SSF51197
UniParc:UPI0001B16598	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:14110228..14112183

Molecular Weight (calculated)

40961.3 Da

IEP (calculated)

5.746

GRAVY (calculated)

-0.662

Length

352 amino acids

Sequence
(BLAST)

001: MGEVDTAFIQ EPEHRPKLSP NQAEGIPIID LSPITNHAVS DPSAIENLVK EIESACKEWG FFQVTNHGVP LTLRQNIEKA SRLFFEQTQE EKKKVSRDEK
101: STTGYYDTEH TKNVRDWKEV FDFLAKDPTF IPVTSDEHDD RVTHWTNVSP EYPPNFRDIM EEYIQEVEKL SFKLLELIAL SLGLEAKRFE EFFMKDQTSF
201: IRLNHYPPCP YPHLALGVGR HKDGGALTVL AQDEVGGLEV KRKADQEWIR VKPTPDAYII NVGDLIQVWS NDAYESVEHR VMVNSEKERF SIPFFFNPAH
301: DIEVKPLEEL TNEHNPSKYR PYKWGKFLVH RKGSNFKKQN VENIQIYHYK IT

Best Arabidopsis Sequence Match ( AT3G19010.4 )
(BLAST)

001: MEDLDPTYIQ APEHRSDSNF IPNQPEEIPV IDLSRLDDPE DVQNVISEIG DACEKWGFFQ VLNHGVPSDA RQRVEKTVKM FFDLPMEEKI KVKRDDVNPV
101: GYHDGEHTKN VKDWKEVFDI YFKDPMVIPS TTDPEDEGLR LVYNKWPQSP SDFREACEVY ARHAEKLAFK LLELISLSLG LPKERFHDYF KEQMSFFRIN
201: RYPPCPRPDL ALGVGHHKDA DVISLLAQDD VGGLQVSRRS DGVWFPIRPV PNALVINIGN CMEIWTNDKY WSAEHRVVVN TTRERYSIPF FLLPSHDVEV
301: KPLEELVSPE NPPKYKGYKW GKFYVSRNRS DFRKLEIENI QIDDFKVKT

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LJ65]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.