Factsheet for VIT_03s0063g01220.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 4
peroxisome 1
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0063g01250.t01	Wine grape	cytosol	63.16	31.75
VIT_03s0063g01160.t01	Wine grape	cytosol	70.53	24.72
VIT_03s0063g01290.t01	Wine grape	cytosol	77.89	21.64
VIT_03s0063g01330.t01	Wine grape	cytosol	68.42	20.83
VIT_03s0063g01150.t01	Wine grape	cytosol	73.68	20.47
VIT_03s0063g01210.t01	Wine grape	cytosol	72.63	20.18
VIT_03s0063g01260.t01	Wine grape	cytosol	71.58	19.88
KRH71199	Soybean	cytosol	68.42	18.47
VIT_03s0063g01340.t01	Wine grape	cytosol	67.37	18.44
KRH71201	Soybean	cytosol	67.37	18.18
KRH71198	Soybean	cytosol	66.32	17.9
KRH71196	Soybean	cytosol	66.32	17.9
VIT_03s0063g01180.t01	Wine grape	cytosol	73.68	17.81
KRH50228	Soybean	cytosol	65.26	17.61
VIT_03s0063g01280.t01	Wine grape	cytosol	45.26	17.41
KRH49792	Soybean	nucleus	50.53	16.72
KRH50226	Soybean	cytosol	62.11	16.71
KRH71195	Soybean	cytosol	61.05	16.2
Solyc09g018420.1.1	Tomato	cytosol	16.84	15.38
KRH50227	Soybean	cytoskeleton, cytosol, peroxisome	36.84	14.23
Solyc09g042210.1.1	Tomato	cytosol, mitochondrion, nucleus, peroxisome	18.95	13.85
VIT_03s0063g01310.t01	Wine grape	cytosol	72.63	11.69
VIT_02s0234g00010.t01	Wine grape	cytosol	37.89	10.08
VIT_04s0044g01520.t01	Wine grape	cytosol	37.89	9.6
VIT_04s0044g01650.t01	Wine grape	cytosol	35.79	9.02
VIT_18s0001g01390.t01	Wine grape	cytosol	34.74	8.73
VIT_16s0022g02310.t01	Wine grape	cytosol	34.74	8.64
VIT_15s0048g01320.t01	Wine grape	cytosol	33.68	8.33

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	ProteinID:CBI32479	ProteinID:CBI32479.3	UniProt:D7TPQ6	EMBL:FN596006
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114
InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFscan:PS51471
PANTHER:PTHR10209	PANTHER:PTHR10209:SF98	SUPFAM:SSF51197	TIGR:TC60430	UniParc:UPI0001BE3C07	ArrayExpress:VIT_03s0063g01220
EnsemblPlantsGene:VIT_03s0063g01220	EnsemblPlants:VIT_03s0063g01220.t01	:	:	:	:

Description

No Description!

Coordinates

chr3:-:4701583..4707486

Molecular Weight (calculated)

10729.7 Da

IEP (calculated)

5.125

GRAVY (calculated)

-0.457

Length

95 amino acids

Sequence
(BLAST)

1: MAADLWLGIR EIVPQKCRLY GRSLGVGRHK DSGALTFLAQ DDVGGLEVNR KTDGEWVRVK PTPDAYIINV GDIVQVWSND TYESVEHRVM ENSER

Best Arabidopsis Sequence Match ( AT3G19000.1 )
(BLAST)

001: MGELDEAFIQ APEHRPNTHL TNSGDFIFSD EIPTIDLSSL EDTHHDKTAI AKEIAEACKR WGFFQVINHG LPSALRHRVE KTAAEFFNLT TEEKRKVKRD
101: EVNPMGYHDE EHTKNVRDWK EIFDFFLQDS TIVPASPEPE DTELRKLTNQ WPQNPSHFRE VCQEYAREVE KLAFRLLELV SISLGLPGDR LTGFFNEQTS
201: FLRFNHYPPC PNPELALGVG RHKDGGALTV LAQDSVGGLQ VSRRSDGQWI PVKPISDALI INMGNCIQVW TNDEYWSAEH RVVVNTSKER FSIPFFFFPS
301: HEANIEPLEE LISEENPPCY KKYNWGKFFV SRNRSDFKKL EVENIQIDHF KA

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LJ66]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.