Factsheet for VIT_03s0063g01290.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0063g01330.t01	Wine grape	cytosol	83.33	91.35
VIT_03s0063g01260.t01	Wine grape	cytosol	89.18	89.18
VIT_03s0063g01150.t01	Wine grape	cytosol	88.6	88.6
VIT_03s0063g01280.t01	Wine grape	cytosol	62.57	86.64
VIT_03s0063g01210.t01	Wine grape	cytosol	85.67	85.67
VIT_03s0063g01160.t01	Wine grape	cytosol	64.62	81.55
VIT_03s0063g01220.t01	Wine grape	cytosol	21.64	77.89
VIT_03s0063g01180.t01	Wine grape	cytosol	88.89	77.35
VIT_03s0063g01250.t01	Wine grape	cytosol	40.94	74.07
VIT_03s0063g01340.t01	Wine grape	cytosol	66.08	65.13
GSMUA_Achr7P08230_001	Banana	cytosol	57.6	60.99
GSMUA_Achr7P08240_001	Banana	cytosol	55.56	60.51
Solyc01g108860.2.1	Tomato	cytosol	60.82	59.26
PGSC0003DMT400066714	Potato	cytosol	60.82	59.26
PGSC0003DMT400066712	Potato	cytosol	27.19	58.86
TraesCS4D01G079900.1	Wheat	cytosol	55.26	54.31
TraesCS4A01G234100.1	Wheat	cytosol	54.97	54.02
Os03t0618300-01	Rice	cytosol	55.56	53.98
TraesCS4B01G081200.1	Wheat	cytosol	54.39	53.45
Zm00001d033327_P001	Maize	cytosol	47.66	52.92
EER91221	Sorghum	cytosol	52.05	51.9
VIT_03s0063g01310.t01	Wine grape	cytosol	88.6	51.36
OQU91363	Sorghum	cytosol	53.22	51.12
KXG38014	Sorghum	cytosol	51.17	50.72
HORVU4Hr1G013840.1	Barley	cytosol	55.26	49.09
Os08t0249900-00	Rice	cytosol, nucleus, peroxisome	35.09	44.94
Zm00001d013725_P002	Maize	cytosol	44.74	41.24
VIT_04s0044g01650.t01	Wine grape	cytosol	30.12	27.32
VIT_18s0001g01390.t01	Wine grape	cytosol	29.53	26.72
VIT_16s0022g02310.t01	Wine grape	cytosol	29.53	26.44
VIT_02s0234g00010.t01	Wine grape	cytosol	27.19	26.05
VIT_04s0044g01520.t01	Wine grape	cytosol	27.78	25.33
VIT_15s0048g01320.t01	Wine grape	cytosol	27.78	24.74

Protein Annotations

EntrezGene:100258965	wikigene:100258965	EntrezGene:100263992	wikigene:100263992	Gene3D:2.60.120.330	MapMan:50.1.13
EMBL:AM460108	ProteinID:CAN83261	ProteinID:CAN83261.1	ProteinID:CBI32486	ProteinID:CBI32486.3	UniProt:D7TPR3
InterPro:DIOX_N	EMBL:FN596006	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	EntrezGene:LOC100258965	wikigene:LOC100258965	EntrezGene:LOC100263992	wikigene:LOC100263992	InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF98
SUPFAM:SSF51197	TIGR:TC63221	TIGR:TC70934	UniParc:UPI00015C88B8	ArrayExpress:VIT_03s0063g01290	EnsemblPlantsGene:VIT_03s0063g01290
EnsemblPlants:VIT_03s0063g01290.t01	unigene:Vvi.24388	unigene:Vvi.24604	RefSeq:XP_002284917	RefSeq:XP_002284917.1	RefSeq:XP_003631676
RefSeq:XP_003631676.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3:-:4754818..4756280

Molecular Weight (calculated)

39265.5 Da

IEP (calculated)

6.300

GRAVY (calculated)

-0.500

Length

342 amino acids

Sequence
(BLAST)

001: MGEVDPAFIQ DTQHRPKLAV IEAEGIPLID LSSANASNHV SQIADACKNW GFFQVINHGV PSESRRKIED AARKFFALPL EEKRKVSRDE VNPFGYFDTE
101: HTKNVRDWKE VFDIVASSPA FIPASPNPDD KELEKLINQW PQYPPELREV CEEYAREMEK LAVNLLGLLS LSLGLPENRF NLLFEESTNF IRLNHYPPCS
201: IPHLALGIGR HKDSGALTFL AQDDVGGLEV KRKTDGEWVR VKPTPDAYII NVGDIVQVWS NDTYESVEHR VMVNSERERF SIPFVLSPGH HVWVKPLEEL
301: TKGEKPKYRA YNWGKFFVTR RRSNFKKLDV ENLQISHFRV SE

Best Arabidopsis Sequence Match ( AT3G19000.1 )
(BLAST)

001: MGELDEAFIQ APEHRPNTHL TNSGDFIFSD EIPTIDLSSL EDTHHDKTAI AKEIAEACKR WGFFQVINHG LPSALRHRVE KTAAEFFNLT TEEKRKVKRD
101: EVNPMGYHDE EHTKNVRDWK EIFDFFLQDS TIVPASPEPE DTELRKLTNQ WPQNPSHFRE VCQEYAREVE KLAFRLLELV SISLGLPGDR LTGFFNEQTS
201: FLRFNHYPPC PNPELALGVG RHKDGGALTV LAQDSVGGLQ VSRRSDGQWI PVKPISDALI INMGNCIQVW TNDEYWSAEH RVVVNTSKER FSIPFFFFPS
301: HEANIEPLEE LISEENPPCY KKYNWGKFFV SRNRSDFKKL EVENIQIDHF KA

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LJ66]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.