Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_03s0063g01220.t01 | Wine grape | cytosol | 31.75 | 63.16 |
| VIT_03s0063g01160.t01 | Wine grape | cytosol | 73.02 | 50.92 |
| VIT_03s0063g01150.t01 | Wine grape | cytosol | 80.95 | 44.74 |
| VIT_03s0063g01330.t01 | Wine grape | cytosol | 71.96 | 43.59 |
| VIT_03s0063g01260.t01 | Wine grape | cytosol | 76.19 | 42.11 |
| VIT_03s0063g01210.t01 | Wine grape | cytosol | 74.6 | 41.23 |
| VIT_03s0063g01290.t01 | Wine grape | cytosol | 74.07 | 40.94 |
| VIT_03s0063g01180.t01 | Wine grape | cytosol | 78.31 | 37.66 |
| VIT_03s0063g01280.t01 | Wine grape | cytosol | 46.03 | 35.22 |
| GSMUA_Achr7P08240_001 | Banana | cytosol | 58.2 | 35.03 |
| GSMUA_Achr7P08230_001 | Banana | cytosol | 57.67 | 33.75 |
| VIT_03s0063g01340.t01 | Wine grape | cytosol | 61.38 | 33.43 |
| Zm00001d033327_P001 | Maize | cytosol | 51.85 | 31.82 |
| TraesCS4A01G234100.1 | Wheat | cytosol | 58.2 | 31.61 |
| TraesCS4D01G079900.1 | Wheat | cytosol | 57.67 | 31.32 |
| Solyc01g108860.2.1 | Tomato | cytosol | 57.67 | 31.05 |
| PGSC0003DMT400066714 | Potato | cytosol | 57.14 | 30.77 |
| TraesCS4B01G081200.1 | Wheat | cytosol | 56.61 | 30.75 |
| Os03t0618300-01 | Rice | cytosol | 56.61 | 30.4 |
| KXG38014 | Sorghum | cytosol | 51.85 | 28.41 |
| HORVU4Hr1G013840.1 | Barley | cytosol | 57.67 | 28.31 |
| OQU91363 | Sorghum | cytosol | 51.85 | 27.53 |
| EER91221 | Sorghum | cytosol | 49.74 | 27.41 |
| VIT_03s0063g01310.t01 | Wine grape | cytosol | 75.13 | 24.07 |
| Zm00001d013725_P002 | Maize | cytosol | 42.33 | 21.56 |
| VIT_02s0234g00010.t01 | Wine grape | cytosol | 31.22 | 16.53 |
| VIT_16s0022g02310.t01 | Wine grape | cytosol | 33.33 | 16.49 |
| Os08t0249900-00 | Rice | cytosol, nucleus, peroxisome | 23.28 | 16.48 |
| VIT_18s0001g01390.t01 | Wine grape | cytosol | 32.28 | 16.14 |
| VIT_04s0044g01650.t01 | Wine grape | cytosol | 30.69 | 15.38 |
| VIT_15s0048g01320.t01 | Wine grape | cytosol | 30.69 | 15.1 |
| VIT_04s0044g01520.t01 | Wine grape | cytosol | 29.1 | 14.67 |
| PGSC0003DMT400066712 | Potato | cytosol | 1.59 | 1.9 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:50.1.13 | ProteinID:CCB56910 | ProteinID:CCB56910.1 | UniProt:F6HQF3 | EMBL:FN596006 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 |
| InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFscan:PS51471 |
| PANTHER:PTHR10209 | PANTHER:PTHR10209:SF98 | SUPFAM:SSF51197 | UniParc:UPI0002108B53 | ArrayExpress:VIT_03s0063g01250 | EnsemblPlantsGene:VIT_03s0063g01250 |
| EnsemblPlants:VIT_03s0063g01250.t01 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3:-:4712177..4721989
Molecular Weight (calculated)
22161.7 Da
IEP (calculated)
5.375
GRAVY (calculated)
-0.341
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MHPRIEASFK EVCEEYAREM EKLAFKMLGL ISLSLGLPEN RFNLFFEEST TFIRLNHYPP CPIPHLALGV RCQKDAEALT ILAQDDVRGL EVKQKTDGEW
101: IRVKPTLDAY IINVGDIIQV WSNDTYESVE HRVMVNSERE RFLIPFFFNP EHRVWVQPLE EMTKGEKPKY TTWENSLLRE STIISRSLM
101: IRVKPTLDAY IINVGDIIQV WSNDTYESVE HRVMVNSERE RFLIPFFFNP EHRVWVQPLE EMTKGEKPKY TTWENSLLRE STIISRSLM
001: MGELDEAFIQ APEHRPNTHL TNSGDFIFSD EIPTIDLSSL EDTHHDKTAI AKEIAEACKR WGFFQVINHG LPSALRHRVE KTAAEFFNLT TEEKRKVKRD
101: EVNPMGYHDE EHTKNVRDWK EIFDFFLQDS TIVPASPEPE DTELRKLTNQ WPQNPSHFRE VCQEYAREVE KLAFRLLELV SISLGLPGDR LTGFFNEQTS
201: FLRFNHYPPC PNPELALGVG RHKDGGALTV LAQDSVGGLQ VSRRSDGQWI PVKPISDALI INMGNCIQVW TNDEYWSAEH RVVVNTSKER FSIPFFFFPS
301: HEANIEPLEE LISEENPPCY KKYNWGKFFV SRNRSDFKKL EVENIQIDHF KA
101: EVNPMGYHDE EHTKNVRDWK EIFDFFLQDS TIVPASPEPE DTELRKLTNQ WPQNPSHFRE VCQEYAREVE KLAFRLLELV SISLGLPGDR LTGFFNEQTS
201: FLRFNHYPPC PNPELALGVG RHKDGGALTV LAQDSVGGLQ VSRRSDGQWI PVKPISDALI INMGNCIQVW TNDEYWSAEH RVVVNTSKER FSIPFFFFPS
301: HEANIEPLEE LISEENPPCY KKYNWGKFFV SRNRSDFKKL EVENIQIDHF KA
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LJ66]
SUBAcon: [peroxisome,cytoskeleton,cytosol]
SUBAcon: [peroxisome,cytoskeleton,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.