Factsheet for Solyc09g018420.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
peroxisome 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
BaCelLo:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g042210.1.1	Tomato	cytosol, mitochondrion, nucleus, peroxisome	55.77	44.62
Solyc10g045770.1.1	Tomato	cytosol	27.88	26.61
Solyc10g045690.1.1	Tomato	cytosol, nucleus, peroxisome	35.58	19.47
VIT_03s0063g01220.t01	Wine grape	cytosol	15.38	16.84
Solyc09g009110.2.1	Tomato	cytosol	51.92	14.29
Solyc11g072310.1.1	Tomato	cytosol	49.04	13.46
Solyc03g006880.2.1	Tomato	cytosol	48.08	13.23
Solyc06g050110.1.1	Tomato	cytosol	45.19	12.95
Solyc06g035530.2.1	Tomato	cytosol	42.31	11.83
Solyc01g093980.2.1	Tomato	cytosol	40.38	11.54
Solyc11g013360.1.1	Tomato	cytosol	34.62	10.43
Solyc12g013780.1.1	Tomato	cytosol	27.88	7.77
KRH50228	Soybean	cytosol	25.96	7.67
Solyc01g108880.2.1	Tomato	cytosol, extracellular	25.0	7.43
Solyc01g108860.2.1	Tomato	cytosol	25.0	7.41
KRH71196	Soybean	cytosol	25.0	7.39
KRH50226	Soybean	cytosol	25.0	7.37
KRH71198	Soybean	cytosol	24.04	7.1
KRH71199	Soybean	cytosol	24.04	7.1
KRH71201	Soybean	cytosol	24.04	7.1
KRH71195	Soybean	cytosol	24.04	6.98
KRH50227	Soybean	cytoskeleton, cytosol, peroxisome	15.38	6.5
KRH49792	Soybean	nucleus	16.35	5.92
Solyc10g046820.1.1	Tomato	cytosol, nucleus, peroxisome	5.77	3.05

Protein Annotations

EnsemblPlants:Solyc09g018420.1.1	EnsemblPlantsGene:Solyc09g018420.1	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443
InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF140	PFAM:PF03171	SUPFAM:SSF51197	UniParc:UPI000276C2E6
UniProt:K4CSA6	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr9:+:14827775..14828292

Molecular Weight (calculated)

12424.9 Da

IEP (calculated)

9.597

GRAVY (calculated)

-0.499

Length

104 amino acids

Sequence
(BLAST)

001: MKLNYYPPCK KPELTLGARS HYDLTSFIGS HQDCVNEFHV FVDNEWYFVT PNFNAFVVTR RHTYGYKIYT QALHNKALCD GRYKSCLHKE LLRITFFHSL
101: SRKR

Best Arabidopsis Sequence Match ( AT4G25420.1 )
(BLAST)

001: MAVSFVTTSP EEEDKPKLGL GNIQTPLIFN PSMLNLQANI PNQFIWPDDE KPSINVLELD VPLIDLQNLL SDPSSTLDAS RLISEACKKH GFFLVVNHGI
101: SEELISDAHE YTSRFFDMPL SEKQRVLRKS GESVGYASSF TGRFSTKLPW KETLSFRFCD DMSRSKSVQD YFCDALGHGF QPFGKVYQEY CEAMSSLSLK
201: IMELLGLSLG VKRDYFREFF EENDSIMRLN YYPPCIKPDL TLGTGPHCDP TSLTILHQDH VNGLQVFVEN QWRSIRPNPK AFVVNIGDTF MALSNDRYKS
301: CLHRAVVNSE SERKSLAFFL CPKKDRVVTP PRELLDSITS RRYPDFTWSM FLEFTQKHYR ADMNTLQAFS DWLTKPI

Arabidopsis Description

GA20OX1Gibberellin 20 oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39110]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.