Factsheet for TraesCS5B01G560300.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, peroxisome, plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G566200.1	Wheat	cytosol, peroxisome, plastid	97.0	98.61
TraesCS4A01G319100.1	Wheat	cytosol, peroxisome, plastid	97.28	97.81
HORVU5Hr1G124120.1	Barley	cytosol	94.01	95.83
GSMUA_Achr8P19120_001	Banana	cytosol, extracellular, peroxisome	62.4	74.35
GSMUA_Achr2P01010_001	Banana	cytosol, peroxisome, plastid	62.13	72.84
EER90481	Sorghum	cytosol	74.39	72.03
Os03t0856700-02	Rice	cytosol, mitochondrion	70.57	69.62
Zm00001d034898_P001	Maize	plastid	73.3	66.58
PGSC0003DMT400086432	Potato	cytosol	28.07	66.03
PGSC0003DMT400092587	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	28.34	64.6
GSMUA_AchrUn_...	Banana	cytosol	56.13	63.78
CDY49714	Canola	cytosol, nucleus, peroxisome	60.76	63.71
Bra019165.1-P	Field mustard	cytosol	60.49	63.43
VIT_16s0022g02310.t01	Wine grape	cytosol	65.67	63.09
CDY72226	Canola	mitochondrion	44.14	62.55
PGSC0003DMT400036523	Potato	cytosol	52.86	62.38
KRG91415	Soybean	cytosol	64.85	62.14
PGSC0003DMT400062314	Potato	cytosol	63.76	61.9
Solyc03g006880.2.1	Tomato	cytosol	63.49	61.64
VIT_15s0048g01320.t01	Wine grape	cytosol	64.31	61.46
KRH35405	Soybean	cytosol	60.76	61.1
KRH38652	Soybean	cytosol	63.49	60.99
CDX92707	Canola	cytosol, nucleus, peroxisome	61.85	59.27
PGSC0003DMT400090397	Potato	cytosol	60.22	59.25
PGSC0003DMT400071866	Potato	cytosol	60.22	58.93
PGSC0003DMT400042644	Potato	cytosol	53.95	58.93
AT4G25420.1	Thale cress	cytosol, nucleus, peroxisome	60.22	58.62
Solyc06g035530.2.1	Tomato	cytosol	59.4	58.6
TraesCS3B01G432800.1	Wheat	cytosol	57.22	58.33
Solyc11g072310.1.1	Tomato	cytosol	60.22	58.31
PGSC0003DMT400091205	Potato	cytosol, nucleus, peroxisome	25.07	58.23
KRH09174	Soybean	cytosol	48.23	58.22
PGSC0003DMT400090198	Potato	mitochondrion	14.17	57.78
CDX94446	Canola	cytosol, nucleus, peroxisome	59.13	57.71
CDY55723	Canola	cytosol, nucleus, peroxisome	59.13	57.71
Solyc09g009110.2.1	Tomato	cytosol	59.4	57.67
Bra013890.1-P	Field mustard	cytosol	58.86	57.45
Solyc01g093980.2.1	Tomato	cytosol	56.95	57.42
PGSC0003DMT400000036	Potato	cytosol	56.68	56.99
CDY27101	Canola	cytosol, nucleus, peroxisome	57.77	56.23
CDY58871	Canola	cytosol, endoplasmic reticulum, peroxisome	57.77	56.08
Bra022565.1-P	Field mustard	cytosol	57.49	55.97
Solyc06g050110.1.1	Tomato	cytosol	55.31	55.92
Bra005927.1-P	Field mustard	cytosol	49.59	55.83
AT5G51810.1	Thale cress	cytosol, nucleus, peroxisome	57.49	55.82
CDX91609	Canola	cytosol, nucleus, peroxisome	57.49	55.82
KRH65199	Soybean	cytosol	58.04	55.76
CDX99892	Canola	cytosol, nucleus, peroxisome	57.49	55.67
CDY00499	Canola	cytosol, nucleus, peroxisome	57.49	55.53
CDX99893	Canola	cytosol, nucleus, peroxisome	57.49	55.53
Bra028277.1-P	Field mustard	cytosol, nucleus, peroxisome	57.49	55.53
PGSC0003DMT400088638	Potato	cytosol	38.15	55.34
CDX81038	Canola	cytosol, nucleus, peroxisome	56.95	55.29
CDY00263	Canola	cytosol, nucleus, peroxisome	41.42	54.48
CDX98998	Canola	cytosol, nucleus, peroxisome	56.13	54.35
CDX70015	Canola	cytosol, nucleus, peroxisome	56.13	54.35
Bra009285.1-P	Field mustard	cytosol	55.86	54.09
KRH48309	Soybean	cytosol	58.04	53.79
AT5G07200.1	Thale cress	cytosol, nucleus, peroxisome	55.59	53.68
Bra028706.1-P	Field mustard	cytosol	55.04	53.3
CDY05017	Canola	cytosol, nucleus, peroxisome	55.04	53.3
CDY14054	Canola	cytosol, nucleus, peroxisome	55.04	53.3
PGSC0003DMT400088528	Potato	cytosol, peroxisome, plastid	18.53	52.71
AT1G60980.1	Thale cress	cytosol, mitochondrion, peroxisome	53.95	52.66
Solyc10g045690.1.1	Tomato	cytosol, nucleus, peroxisome	27.25	52.63
Bra027106.1-P	Field mustard	cytosol	52.86	51.6
CDY13228	Canola	cytosol	10.35	51.35
PGSC0003DMT400091526	Potato	cytosol	32.97	50.63
CDY52529	Canola	cytosol, nucleus, peroxisome	52.32	50.39
Bra010064.1-P	Field mustard	cytosol	51.5	50.13
PGSC0003DMT400097234	Potato	cytosol, mitochondrion, plastid	16.89	49.21
Bra039251.1-P	Field mustard	cytosol	50.14	49.2
CDY64867	Canola	cytosol	49.86	48.93
Bra031467.1-P	Field mustard	cytosol	49.32	48.01
CDY60083	Canola	vacuole	50.68	46.27
CDY64866	Canola	cytosol, nucleus, peroxisome	38.96	46.13
CDY12880	Canola	cytosol, nucleus, vacuole	52.86	45.86
CDY44829	Canola	cytosol	48.77	45.78
TraesCS1B01G274200.1	Wheat	cytosol	50.95	45.39
TraesCS3B01G439900.1	Wheat	plastid	51.77	45.13
Solyc10g045770.1.1	Tomato	cytosol	13.08	44.04
PGSC0003DMT400086504	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	13.08	42.48
Solyc10g046820.1.1	Tomato	cytosol, nucleus, peroxisome	22.62	42.13
PGSC0003DMT400089703	Potato	nucleus	16.89	41.33
CDY13227	Canola	cytosol	19.07	40.94
TraesCS4B01G081200.1	Wheat	cytosol	27.52	29.02

Protein Annotations

EnsemblPlants:TraesCS5B01G560300.1	EnsemblPlantsGene:TraesCS5B01G560300	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF140	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SEG:seg	SUPFAM:SSF51197	MapMan:11.6.1.5	:	:

Description

No Description!

Coordinates

chr5B:+:706852578..706853782

Molecular Weight (calculated)

40845.7 Da

IEP (calculated)

6.579

GRAVY (calculated)

-0.238

Length

367 amino acids

Sequence
(BLAST)

001: MVQPVFDAAV LSGRADIPSQ FIWPEGESPT PDAAEELHVP LIDIGGMLSG DAAAAAEVTR LVGEACERHG FFQVVNHGID AELLADAHRC VDAFFTMPLP
101: EKQRALRRPG ESCGYASSFT GRFASKLPWK ETLSFRSCPS DPALVVDYIV ATLGEDHRRL GEVYARYCSE MSRLSLEIME VLGESLGVGR AHYRRFFEGN
201: DSIMRLNYYP PCQRPMETLG TGPHCDPTSL TILHQDNVGG LQVHTEGRWR SIRPRADAFV VNIGDTFMAL SNGRYKSCLH RAVVNSKVPR KSLAFFLCPE
301: MDKVVAPPGT LVDAANPRAY PDFTWRSLLD FTQKHYRADM KTLEVFSSWI VQQQQGQLAL QPQPART

Best Arabidopsis Sequence Match ( AT4G25420.1 )
(BLAST)

001: MAVSFVTTSP EEEDKPKLGL GNIQTPLIFN PSMLNLQANI PNQFIWPDDE KPSINVLELD VPLIDLQNLL SDPSSTLDAS RLISEACKKH GFFLVVNHGI
101: SEELISDAHE YTSRFFDMPL SEKQRVLRKS GESVGYASSF TGRFSTKLPW KETLSFRFCD DMSRSKSVQD YFCDALGHGF QPFGKVYQEY CEAMSSLSLK
201: IMELLGLSLG VKRDYFREFF EENDSIMRLN YYPPCIKPDL TLGTGPHCDP TSLTILHQDH VNGLQVFVEN QWRSIRPNPK AFVVNIGDTF MALSNDRYKS
301: CLHRAVVNSE SERKSLAFFL CPKKDRVVTP PRELLDSITS RRYPDFTWSM FLEFTQKHYR ADMNTLQAFS DWLTKPI

Arabidopsis Description

GA20OX1Gibberellin 20 oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39110]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.