Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX99287 | Canola | cytoskeleton, cytosol, peroxisome | 97.79 | 63.51 |
| Bra022378.1-P | Field mustard | cytosol | 97.79 | 63.32 |
| CDX92296 | Canola | cytosol, nucleus, peroxisome | 97.79 | 63.32 |
| AT3G19010.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 90.71 | 58.74 |
| CDX82318 | Canola | cytosol | 64.6 | 41.36 |
| CDY22995 | Canola | cytosol | 64.6 | 41.36 |
| CDX99288 | Canola | cytosol | 64.16 | 41.19 |
| CDX82317 | Canola | cytosol | 64.16 | 41.08 |
| CDY22994 | Canola | cytosol | 64.16 | 41.08 |
| CDX92294 | Canola | cytosol | 63.72 | 40.91 |
| KRH49793 | Soybean | cytosol | 57.96 | 38.19 |
| GSMUA_Achr7P08240_001 | Banana | cytosol | 52.65 | 37.9 |
| GSMUA_Achr7P08230_001 | Banana | cytosol | 53.98 | 37.77 |
| VIT_03s0063g01340.t01 | Wine grape | cytosol | 57.08 | 37.18 |
| KRG89226 | Soybean | cytosol | 57.52 | 35.71 |
| Zm00001d033327_P001 | Maize | cytosol | 47.79 | 35.06 |
| OQU91363 | Sorghum | cytosol | 53.1 | 33.71 |
| TraesCS4A01G234100.1 | Wheat | cytosol | 50.88 | 33.05 |
| TraesCS4D01G079900.1 | Wheat | cytosol | 50.88 | 33.05 |
| Os03t0618300-01 | Rice | cytosol | 50.88 | 32.67 |
| TraesCS4B01G081200.1 | Wheat | cytosol | 50.0 | 32.47 |
| EER91221 | Sorghum | cytosol | 46.9 | 30.9 |
| KXG38014 | Sorghum | cytosol | 46.02 | 30.14 |
| HORVU4Hr1G013840.1 | Barley | cytosol | 50.44 | 29.61 |
| CDY72226 | Canola | mitochondrion | 31.42 | 27.41 |
| CDY00263 | Canola | cytosol, nucleus, peroxisome | 30.09 | 24.37 |
| Os08t0249900-00 | Rice | cytosol, nucleus, peroxisome | 27.43 | 23.22 |
| CDY13228 | Canola | cytosol | 7.52 | 22.97 |
| Zm00001d013725_P002 | Maize | cytosol | 37.17 | 22.64 |
| CDY49714 | Canola | cytosol, nucleus, peroxisome | 31.86 | 20.57 |
| CDX81038 | Canola | cytosol, nucleus, peroxisome | 33.19 | 19.84 |
| CDY05017 | Canola | cytosol, nucleus, peroxisome | 33.19 | 19.79 |
| CDX70015 | Canola | cytosol, nucleus, peroxisome | 33.19 | 19.79 |
| CDY58871 | Canola | cytosol, endoplasmic reticulum, peroxisome | 32.74 | 19.58 |
| CDX98998 | Canola | cytosol, nucleus, peroxisome | 32.74 | 19.53 |
| CDY14054 | Canola | cytosol, nucleus, peroxisome | 32.3 | 19.26 |
| CDY27101 | Canola | cytosol, nucleus, peroxisome | 31.86 | 19.1 |
| CDX91609 | Canola | cytosol, nucleus, peroxisome | 31.86 | 19.05 |
| CDY64867 | Canola | cytosol | 31.42 | 18.98 |
| CDY55723 | Canola | cytosol, nucleus, peroxisome | 31.42 | 18.88 |
| CDX94446 | Canola | cytosol, nucleus, peroxisome | 31.42 | 18.88 |
| CDX92707 | Canola | cytosol, nucleus, peroxisome | 31.86 | 18.8 |
| CDX99892 | Canola | cytosol, nucleus, peroxisome | 31.42 | 18.73 |
| CDX99893 | Canola | cytosol, nucleus, peroxisome | 31.42 | 18.68 |
| CDY00499 | Canola | cytosol, nucleus, peroxisome | 30.97 | 18.42 |
| CDY52529 | Canola | cytosol, nucleus, peroxisome | 30.09 | 17.85 |
| CDY60083 | Canola | vacuole | 31.42 | 17.66 |
| CDY71240 | Canola | cytosol, peroxisome, plastid | 19.47 | 16.48 |
| CDY44829 | Canola | cytosol | 28.32 | 16.37 |
| CDY12880 | Canola | cytosol, nucleus, vacuole | 30.09 | 16.08 |
| CDY64866 | Canola | cytosol, nucleus, peroxisome | 20.8 | 15.16 |
| CDY70184 | Canola | cytosol | 21.68 | 15.03 |
| CDY13227 | Canola | cytosol | 0.44 | 0.58 |
| CDY36334 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:50.1.13 | GO:A0A078JUU9 | UniProt:A0A078JUU9 | EnsemblPlants:CDY69351 | ProteinID:CDY69351 |
| ProteinID:CDY69351.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00087018001 | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF127 |
| SUPFAM:SSF51197 | UniParc:UPI0004EDC6D9 | SEG:seg | : | : | : |
Description
BnaCnng63110DBnaCnng63110D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JUU9]
Coordinates
chrLK039220:-:2654..3897
Molecular Weight (calculated)
26280.4 Da
IEP (calculated)
7.128
GRAVY (calculated)
-0.481
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: PMAMPSSTDP EDEGLRVVYN KWPQFPSDFR EACQEYAGHA EKLAFRLLEL ISLSLGLPKE RFHDYFKEQM MSFFRINRYP PCPRPDLALG VGHHKDADVI
101: SLLAQDEVGG LQISRRSDGV WFPIRPVPNA LVINIGNCME VWTNDKYWSA EHRVVVNSTR ERYSIPFFLL PSHNVEVKPL EELLSPENPP RYKGYKYGKF
201: YVSRNRSDFK KLEIQNIQID DFKVVT
101: SLLAQDEVGG LQISRRSDGV WFPIRPVPNA LVINIGNCME VWTNDKYWSA EHRVVVNSTR ERYSIPFFLL PSHNVEVKPL EELLSPENPP RYKGYKYGKF
201: YVSRNRSDFK KLEIQNIQID DFKVVT
001: MGELDEAFIQ APEHRPNTHL TNSGDFIFSD EIPTIDLSSL EDTHHDKTAI AKEIAEACKR WGFFQVINHG LPSALRHRVE KTAAEFFNLT TEEKRKVKRD
101: EVNPMGYHDE EHTKNVRDWK EIFDFFLQDS TIVPASPEPE DTELRKLTNQ WPQNPSHFRE VCQEYAREVE KLAFRLLELV SISLGLPGDR LTGFFNEQTS
201: FLRFNHYPPC PNPELALGVG RHKDGGALTV LAQDSVGGLQ VSRRSDGQWI PVKPISDALI INMGNCIQVW TNDEYWSAEH RVVVNTSKER FSIPFFFFPS
301: HEANIEPLEE LISEENPPCY KKYNWGKFFV SRNRSDFKKL EVENIQIDHF KA
101: EVNPMGYHDE EHTKNVRDWK EIFDFFLQDS TIVPASPEPE DTELRKLTNQ WPQNPSHFRE VCQEYAREVE KLAFRLLELV SISLGLPGDR LTGFFNEQTS
201: FLRFNHYPPC PNPELALGVG RHKDGGALTV LAQDSVGGLQ VSRRSDGQWI PVKPISDALI INMGNCIQVW TNDEYWSAEH RVVVNTSKER FSIPFFFFPS
301: HEANIEPLEE LISEENPPCY KKYNWGKFFV SRNRSDFKKL EVENIQIDHF KA
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LJ66]
SUBAcon: [peroxisome,cytoskeleton,cytosol]
SUBAcon: [peroxisome,cytoskeleton,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.