Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytoskeleton, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69351 | Canola | cytosol, peroxisome | 58.74 | 90.71 |
| CDX92296 | Canola | cytosol, nucleus, peroxisome | 90.54 | 90.54 |
| Bra022378.1-P | Field mustard | cytosol | 90.26 | 90.26 |
| CDX99287 | Canola | cytoskeleton, cytosol, peroxisome | 89.4 | 89.66 |
| AT3G19000.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 61.6 | 61.08 |
| KRH49793 | Soybean | cytosol | 56.45 | 57.43 |
| VIT_03s0063g01340.t01 | Wine grape | cytosol | 55.87 | 56.2 |
| KRG89226 | Soybean | cytosol | 56.73 | 54.4 |
| GSMUA_Achr7P08230_001 | Banana | cytosol | 49.0 | 52.94 |
| GSMUA_Achr7P08240_001 | Banana | cytosol | 47.56 | 52.87 |
| TraesCS4D01G079900.1 | Wheat | cytosol | 49.57 | 49.71 |
| TraesCS4A01G234100.1 | Wheat | cytosol | 49.57 | 49.71 |
| TraesCS4B01G081200.1 | Wheat | cytosol | 49.28 | 49.43 |
| Os03t0618300-01 | Rice | cytosol | 49.28 | 48.86 |
| OQU91363 | Sorghum | cytosol | 49.57 | 48.6 |
| Zm00001d033327_P001 | Maize | cytosol | 41.83 | 47.4 |
| KXG38014 | Sorghum | cytosol | 45.56 | 46.09 |
| EER91221 | Sorghum | cytosol | 45.27 | 46.06 |
| HORVU4Hr1G013840.1 | Barley | cytosol | 49.0 | 44.42 |
| Os08t0249900-00 | Rice | cytosol, nucleus, peroxisome | 31.52 | 41.2 |
| Zm00001d013725_P002 | Maize | cytosol | 39.83 | 37.47 |
| AT4G25420.1 | Thale cress | cytosol, nucleus, peroxisome | 31.23 | 28.91 |
| AT1G60980.1 | Thale cress | cytosol, mitochondrion, peroxisome | 30.37 | 28.19 |
| AT5G07200.1 | Thale cress | cytosol, nucleus, peroxisome | 30.66 | 28.16 |
| AT5G51810.1 | Thale cress | cytosol, nucleus, peroxisome | 30.37 | 28.04 |
| AT1G44090.1 | Thale cress | mitochondrion | 27.51 | 24.94 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:50.1.13 | EntrezGene:821434 | UniProt:A0A178VCV7 | ProteinID:AEE76181.1 | ProteinID:ANM64006.1 |
| ArrayExpress:AT3G19010 | EnsemblPlantsGene:AT3G19010 | RefSeq:AT3G19010 | TAIR:AT3G19010 | RefSeq:AT3G19010-TAIR-G | EnsemblPlants:AT3G19010.1 |
| TAIR:AT3G19010.1 | ProteinID:BAB01697.1 | EMBL:BT002747 | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 |
| InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | RefSeq:NP_001326059.1 | RefSeq:NP_566624.1 | ProteinID:OAP02743.1 |
| InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PRINTS:PR00682 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF127 | UniProt:Q9LJ65 | SUPFAM:SSF51197 |
| UniParc:UPI000000BD9E | SEG:seg | : | : | : | : |
Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LJ65]
Coordinates
chr3:-:6556197..6558017
Molecular Weight (calculated)
40698.2 Da
IEP (calculated)
5.112
GRAVY (calculated)
-0.610
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDLDPTYIQ APEHRSDSNF IPNQPEEIPV IDLSRLDDPE DVQNVISEIG DACEKWGFFQ VLNHGVPSDA RQRVEKTVKM FFDLPMEEKI KVKRDDVNPV
101: GYHDGEHTKN VKDWKEVFDI YFKDPMVIPS TTDPEDEGLR LVYNKWPQSP SDFREACEVY ARHAEKLAFK LLELISLSLG LPKERFHDYF KEQMSFFRIN
201: RYPPCPRPDL ALGVGHHKDA DVISLLAQDD VGGLQVSRRS DGVWFPIRPV PNALVINIGN CMEIWTNDKY WSAEHRVVVN TTRERYSIPF FLLPSHDVEV
301: KPLEELVSPE NPPKYKGYKW GKFYVSRNRS DFRKLEIENI QIDDFKVKT
101: GYHDGEHTKN VKDWKEVFDI YFKDPMVIPS TTDPEDEGLR LVYNKWPQSP SDFREACEVY ARHAEKLAFK LLELISLSLG LPKERFHDYF KEQMSFFRIN
201: RYPPCPRPDL ALGVGHHKDA DVISLLAQDD VGGLQVSRRS DGVWFPIRPV PNALVINIGN CMEIWTNDKY WSAEHRVVVN TTRERYSIPF FLLPSHDVEV
301: KPLEELVSPE NPPKYKGYKW GKFYVSRNRS DFRKLEIENI QIDDFKVKT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.