Factsheet for Zm00001d007894_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95912	Sorghum	cytosol	80.2	82.72
Os07t0169700-01	Rice	plasma membrane	71.07	76.29
TraesCS3A01G399800.1	Wheat	cytosol	65.23	71.79
HORVU3Hr1G089980.2	Barley	cytosol	64.97	71.71
TraesCS3D01G393900.1	Wheat	cytosol	64.47	71.35
TraesCS3B01G432800.1	Wheat	cytosol	64.97	71.11
TraesCS3D01G394000.1	Wheat	cytosol, peroxisome, plastid	63.96	70.19
GSMUA_Achr2P01010_001	Banana	cytosol, peroxisome, plastid	45.43	57.19
GSMUA_Achr8P19120_001	Banana	cytosol, extracellular, peroxisome	43.91	56.17
PGSC0003DMT400086432	Potato	cytosol	21.83	55.13
CDY72226	Canola	mitochondrion	35.79	54.44
Zm00001d034898_P001	Maize	plastid	52.28	50.99
GSMUA_AchrUn_...	Banana	cytosol	41.62	50.77
CDY49714	Canola	cytosol, nucleus, peroxisome	44.67	50.29
VIT_16s0022g02310.t01	Wine grape	cytosol	48.73	50.26
PGSC0003DMT400062314	Potato	cytosol	47.97	50.0
Bra019165.1-P	Field mustard	cytosol	44.42	50.0
Solyc03g006880.2.1	Tomato	cytosol	47.46	49.47
KRH09174	Soybean	cytosol	38.07	49.34
KRH38652	Soybean	cytosol	47.46	48.95
PGSC0003DMT400036523	Potato	cytosol	38.58	48.87
PGSC0003DMT400071866	Potato	cytosol	46.45	48.8
PGSC0003DMT400091205	Potato	cytosol, nucleus, peroxisome	19.54	48.73
Solyc01g093980.2.1	Tomato	cytosol	44.92	48.63
KRG91415	Soybean	cytosol	47.21	48.56
CDY27101	Canola	cytosol, nucleus, peroxisome	46.45	48.54
VIT_15s0048g01320.t01	Wine grape	cytosol	47.21	48.44
CDX91609	Canola	cytosol, nucleus, peroxisome	46.45	48.41
CDY00263	Canola	cytosol, nucleus, peroxisome	34.26	48.39
Solyc06g035530.2.1	Tomato	cytosol	45.69	48.39
Bra022565.1-P	Field mustard	cytosol	46.19	48.28
PGSC0003DMT400000036	Potato	cytosol	44.67	48.22
KRH65199	Soybean	cytosol	46.7	48.17
AT5G51810.1	Thale cress	cytosol, nucleus, peroxisome	46.19	48.15
AT4G25420.1	Thale cress	cytosol, nucleus, peroxisome	45.94	48.01
PGSC0003DMT400092587	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	19.54	47.83
CDY55723	Canola	cytosol, nucleus, peroxisome	45.43	47.61
KRH35405	Soybean	cytosol	43.91	47.4
Bra013890.1-P	Field mustard	cytosol	45.18	47.34
CDY13228	Canola	cytosol	8.88	47.3
CDX99892	Canola	cytosol, nucleus, peroxisome	45.43	47.23
PGSC0003DMT400090397	Potato	cytosol	44.67	47.19
Bra028277.1-P	Field mustard	cytosol, nucleus, peroxisome	45.43	47.11
CDY00499	Canola	cytosol, nucleus, peroxisome	45.43	47.11
CDX99893	Canola	cytosol, nucleus, peroxisome	45.43	47.11
CDX94446	Canola	cytosol, nucleus, peroxisome	44.92	47.07
PGSC0003DMT400042644	Potato	cytosol	40.1	47.02
CDX98998	Canola	cytosol, nucleus, peroxisome	44.92	46.7
CDX92707	Canola	cytosol, nucleus, peroxisome	45.18	46.48
KRH48309	Soybean	cytosol	46.7	46.46
CDX70015	Canola	cytosol, nucleus, peroxisome	44.67	46.44
Solyc11g072310.1.1	Tomato	cytosol	44.67	46.44
Solyc09g009110.2.1	Tomato	cytosol	44.42	46.3
CDY58871	Canola	cytosol, endoplasmic reticulum, peroxisome	44.42	46.3
Bra009285.1-P	Field mustard	cytosol	44.42	46.17
Zm00001d042611_P001	Maize	cytosol	45.18	46.11
AT5G07200.1	Thale cress	cytosol, nucleus, peroxisome	44.16	45.79
CDX81038	Canola	cytosol, nucleus, peroxisome	43.91	45.77
Bra005927.1-P	Field mustard	cytosol	37.82	45.71
AT1G60980.1	Thale cress	cytosol, mitochondrion, peroxisome	43.15	45.21
Solyc06g050110.1.1	Tomato	cytosol	41.62	45.18
CDY14054	Canola	cytosol, nucleus, peroxisome	43.4	45.12
Bra028706.1-P	Field mustard	cytosol	43.15	44.85
CDY05017	Canola	cytosol, nucleus, peroxisome	43.15	44.85
Bra010064.1-P	Field mustard	cytosol	42.89	44.83
Bra027106.1-P	Field mustard	cytosol	42.13	44.15
PGSC0003DMT400088638	Potato	cytosol	28.17	43.87
CDY52529	Canola	cytosol, nucleus, peroxisome	42.39	43.83
PGSC0003DMT400090198	Potato	mitochondrion	9.64	42.22
Bra039251.1-P	Field mustard	cytosol	39.34	41.44
PGSC0003DMT400097234	Potato	cytosol, mitochondrion, plastid	13.2	41.27
CDY64867	Canola	cytosol	39.09	41.18
Bra031467.1-P	Field mustard	cytosol	38.83	40.58
Solyc10g045690.1.1	Tomato	cytosol, nucleus, peroxisome	19.54	40.53
PGSC0003DMT400088528	Potato	cytosol, peroxisome, plastid	13.2	40.31
PGSC0003DMT400091526	Potato	cytosol	24.11	39.75
CDY44829	Canola	cytosol	38.83	39.13
CDY64866	Canola	cytosol, nucleus, peroxisome	30.71	39.03
CDY12880	Canola	cytosol, nucleus, vacuole	41.88	39.01
Zm00001d012212_P001	Maize	plastid	45.69	38.88
CDY60083	Canola	vacuole	39.59	38.81
Solyc10g045770.1.1	Tomato	cytosol	10.66	38.53
PGSC0003DMT400086504	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	10.66	37.17
CDY13227	Canola	cytosol	15.99	36.84
PGSC0003DMT400089703	Potato	nucleus	13.45	35.33
Zm00001d033327_P001	Maize	cytosol	24.87	31.82
Solyc10g046820.1.1	Tomato	cytosol, nucleus, peroxisome	15.74	31.47
Zm00001d013725_P002	Maize	cytosol	24.37	25.88

Protein Annotations

MapMan:11.6.1.5	UniProt:A0A1D6F9M0	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPR005123
ProteinID:ONM27835.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471
PANTHER:PTHR10209	PANTHER:PTHR10209:SF118	SUPFAM:SSF51197	UniParc:UPI000842A80A	EnsemblPlantsGene:Zm00001d007894	EnsemblPlants:Zm00001d007894_P001
EnsemblPlants:Zm00001d007894_T001	SEG:seg	:	:	:	:

Description

gibberellin 20-oxidase2 gibberellin 20-oxidase2

Coordinates

chr2:-:241897454..241898638

Molecular Weight (calculated)

43122.2 Da

IEP (calculated)

7.564

GRAVY (calculated)

-0.218

Length

394 amino acids

Sequence
(BLAST)

001: MAAAAVVFDA EALSREEHIP AQFVWPTEER APAGGVEEVA IPVVDLGEFL RRGVLPRGVA EACERHGVFQ VVNHGVGAAL LAEAYRCCDA FYALPLADKQ
101: RAQRRHGENH GYASSFTGRF HCCLPWKETL SFNCPAGAGT ARAVVGYFVD VLGEDYRHMG SLLLYPIFLR ACACHAARTE TGKKCREVYQ EYCDAMTRLA
201: LDVTEVLAAA LGLDRGALRG FFEGGDSVMR LNHYPACRQP HLTLGTGPHR DPTSLTLLHQ DDVGGLQVRA GGGPWRAVRP RADAFVVNIG DTFAALTDGR
301: HTSCLHRAVV TGGGSRRSLA FFLNPPLDRV VRPPGALLQE NKQAGRPRAF PDFTWREFLE FTQKHYRSDA GTMDAFVSWI AGGRRHHGGQ EEGN

Best Arabidopsis Sequence Match ( AT5G51810.1 )
(BLAST)

001: MAILCTTTSP AEKEHEPKQD LEKDQTSPLI FNPSLLNLQS QIPNQFIWPD EEKPSIDIPE LNVPFIDLSS QDSTLEAPRV IAEACTKHGF FLVVNHGVSE
101: SLIADAHRLM ESFFDMPLAG KQKAQRKPGE SCGYASSFTG RFSTKLPWKE TLSFQFSNDN SGSRTVQDYF SDTLGQEFEQ FGKVYQDYCE AMSSLSLKIM
201: ELLGLSLGVN RDYFRGFFEE NDSIMRLNHY PPCQTPDLTL GTGPHCDPSS LTILHQDHVN GLQVFVDNQW QSIRPNPKAF VVNIGDTFMA LSNGIFKSCL
301: HRAVVNRESA RKSMAFFLCP KKDKVVKPPS DILEKMKTRK YPDFTWSMFL EFTQKHYRAD VNTLDSFSNW VITNNNPI

Arabidopsis Description

GA20OX2Gibberellin 20 oxidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39111]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.