CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG96156	Soybean	mitochondrion	56.58	4.94
KRH67868	Soybean	mitochondrion	56.58	4.94
KRH51616	Soybean	cytosol, mitochondrion, vacuole	27.63	3.19
KRH60937	Soybean	plastid	30.26	2.56
Os06t0367100-01	Rice	plastid	19.74	1.66
GSMUA_Achr6P13530_001	Banana	plastid	18.42	1.54
EES01041	Sorghum	plastid	17.11	1.43
TraesCS7A01G336400.1	Wheat	plastid	17.11	1.42
TraesCS7B01G248000.1	Wheat	plastid	17.11	1.42
TraesCS7D01G344000.1	Wheat	plastid	17.11	1.42
KRG98710	Soybean	plastid	14.47	1.22
HORVU7Hr1G082850.6	Barley	cytosol, plastid	0.0	0.0
Zm00001d033399_P001	Maize	endoplasmic reticulum, vacuole	0.0	0.0

Protein Annotations

EMBL:ACUP02004106	EnsemblPlants:KRH56220	EnsemblPlantsGene:GLYMA_06G310900	GO:GO:0003674	GO:GO:0003824	GO:GO:0003844
GO:GO:0005975	GO:GO:0005978	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	InterPro:Branching_enzy	KEGG:00500+2.4.1.18	PANTHER:PTHR43651	PANTHER:PTHR43651:SF1
ProteinID:KRH56220	ProteinID:KRH56220.1	UniParc:UPI000296C383	UniProt:K7KYE9	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr6:+:49948865..49954729

Molecular Weight (calculated)

8485.1 Da

IEP (calculated)

5.632

GRAVY (calculated)

-0.333

Length

76 amino acids

Sequence
(BLAST)

1: MDTPSGIKDS IPAWIKFAVQ APGEIPYSGI YYDPLEENSC VAPLIEDLKV RCERRRKNLL GVSSNFGGSY MHISHD

Best Arabidopsis Sequence Match ( AT5G15843.1 )
(BLAST)

001: MADGRRESVT CSGYREEYQN EGTIPYPVLY ISIVLNPCSS ASISLFANRP LTRGLISAYA FLEAYLIVFS NFLVFLFSLY LRTLASLSIG LSCVTVIIWL
101: AGSGCCSTVP LGVLGCEAVV THAVDSGTTP VSMDEILLVK FLCAIDQLLA VDQWICVYDE RIHPAALWED AKLKGEQPRS NLLGILITFF TFLLIHHQSL
201: LWIGHCFLAL VVSSGHGAER VSRNW

Arabidopsis Description

Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B9E1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.