Factsheet for TraesCS7D01G344000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G248000.1	Wheat	plastid	99.67	99.67
TraesCS7A01G336400.1	Wheat	plastid	97.37	97.37
HORVU7Hr1G082830.1	Barley	plastid	73.19	92.53
EES01041	Sorghum	plastid	82.82	83.55
Os06t0367100-01	Rice	plastid	82.17	83.17
GSMUA_Achr6P13530_001	Banana	plastid	66.41	66.85
VIT_19s0090g00920.t01	Wine grape	plastid	62.25	63.5
CDY29828	Canola	plastid	60.83	62.05
AT3G20440.2	Thale cress	plastid	60.72	61.74
Bra035782.1-P	Field mustard	plastid	60.28	61.5
CDY54647	Canola	plastid	60.18	61.38
Solyc07g064830.2.1	Tomato	nucleus	60.5	61.24
PGSC0003DMT400057446	Potato	cytosol	15.86	56.2
TraesCS7D01G535500.1	Wheat	plastid	22.98	32.31
TraesCS7D01G535400.2	Wheat	golgi	28.56	31.45
TraesCS2D01G290800.4	Wheat	plastid	27.24	30.18
TraesCS7D01G535600.4	Wheat	plastid	21.55	28.97
TraesCS2D01G308600.1	Wheat	plastid	26.48	28.95
KRH56220	Soybean	cytosol	1.42	17.11
Zm00001d033399_P001	Maize	endoplasmic reticulum, vacuole	0.77	5.98

Protein Annotations

KEGG:00500+2.4.1.18	Gene3D:2.60.40.10	Gene3D:2.60.40.1180	MapMan:3.2.2.5	Gene3D:3.20.20.80	InterPro:A-amylase/branching_C
InterPro:Branching_enzy	GO:GO:0003674	GO:GO:0003824	GO:GO:0003844	GO:GO:0004553	GO:GO:0005488
GO:GO:0005975	GO:GO:0005978	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	GO:GO:0016787	GO:GO:0043169	InterPro:Glyco_hydro_13_N	InterPro:Glyco_hydro_13_cat_dom
InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set
PFAM:PF00128	PFAM:PF02806	PFAM:PF02922	PIRSF:PIRSF000463	PANTHER:PTHR43651	PANTHER:PTHR43651:SF4
SMART:SM00642	SUPFAM:SSF51011	SUPFAM:SSF51445	SUPFAM:SSF81296	EnsemblPlantsGene:TraesCS7D01G344000	EnsemblPlants:TraesCS7D01G344000.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7D:+:440559946..440586781

Molecular Weight (calculated)

104894.0 Da

IEP (calculated)

6.636

GRAVY (calculated)

-0.537

Length

914 amino acids

Sequence
(BLAST)

001: MASCPLFLLA PQPPPPLVAA RHCRSPLAGS AHPLTSCRAP RLRRRQSCRC SSSPSSSSSS SSGPRERSPR PRQRKQRTEQ RPGSGSAVDP VGFLVKTGVS
101: DRAFAQFLRD RHKALKDRRW ELYSRFIDLK EGSSGYELLG MHRHRQHRVD FMDWAPGARY CSLIGDFNQW SATENCAREG HLGHDDFGYW FVILEDKLRE
201: GQEPDEYFFQ EYNYVDDYDK GDNGVDAKDL IRRMNEEYWE PGEVTSRKSR WETVAKLYEQ MFGPNGPQTE EELGEIPDAE TRYKNWKATQ KDESSSSSPS
301: YDIIDTGQEF DIFNVVTDRA SFEKFQAKAT PLAYWVEMRK GRKAWIEKYV PAISHKDKYR IYFNTPDGAL ERVPAWATYV LPDAEGMQSY AVHWEPPPEE
401: IYKWRFGRPK VKGSLRIYEC HVGISGSEQK ISSFQEFTSN VLPHIKNAGY NAVQIIGVLE HKDYSSVGYK VTNYFAVSSR FGTPDDFKKL VDEAHGLGLL
501: VLIDIVHSYA SADEMVGLSL FDGSNDCYFH SGKRGHHKYW GTRMFKYDDV DVLHFLLSNL SWWVTEYKID GFQFHSLSSM LYTHNGFSTF TGAIEEYCNQ
601: YVDKDALIYL ILANEMLHEL HPDIITIAED ATYYPGLCEP TTQGGLGFDY WANLSIPEMW LWHLENVPER EWSMNKIMKV LISSNHHMLS YVENHNQSIS
701: GRKSFAEIIL NTGMCSSGSV DDDLIFKASS LLKIIKLITF TTSGGAYLNF MGNEFAHPKR VEFPMSSNEY SFHLACRQWE LLDKGVHKHI FNFDKDIMSL
801: DENERVTSRG SLNVHHCDDT NMVISFTRGP FLFVFNFNPE VPYQLYRVGV DEAGEYQLIL NTDETKYGGR GELKSSQYMK KTSDRRADGC RNSLELALAS
901: RSAQVYKLVR ILRI

Best Arabidopsis Sequence Match ( AT3G20440.2 )
(BLAST)

001: MVSLSNQTRF SFHPNNLVVS EKRRLGISGV NFPRKIKLKI TCFAAERPRQ EKQKKKSQSQ STSDAEAGVD PVGFLTRLGI ADRIFAQFLR ERHKALKDLK
101: DEIFKRHFDF RDFASGFELL GMHRHMEHRV DFMDWGPGSR YGAIIGDFNG WSPTENAARE GLFGHDDYGY WFIILEDKLR EGEEPDELYF QQYNYVDDYD
201: KGDSGVSAEE IFQKANDEYW EPGEDRFIKN RFEVPAKLYE QMFGPNSPQT LEELGDIPDA ETRYKQWKEE HKDDPPSNLP PCDIIDKGQG KPYDIFNVVT
301: SPEWTKKFYE KEPPIPYWLE TRKGRKAWLQ KYIPAVPHGS KYRLYFNTPD GPLERVPAWA TYVQPEDEGK QAYAIHWEPS PEAAYKWKYS KPKVPESLRI
401: YECHVGISGS EPKVSTFEEF TKKVLPHVKR AGYNAIQLIG VPEHKDYFTV GYRVTNFFAA SSRYGTPDDF KRLVDEAHGL GLLVFLDIVH SYAAADQMVG
501: LSLFDGSNDC YFHYGKRGHH KHWGTRMFKY GDLDVLHFLI SNLNWWITEY QVDGYQFHSL ASMIYTHNGF ASFNNDLDDY CNQYVDRDAL MYLILANEIL
601: HVQHPNIITI AEDATYYPGL CEPVSQGGLG FDYYVNLSAS EMWVSLLDNV PDNEWSMSKI VSTLVANKEY ADKMLSYAEN HNQSISGGRS FAEILFGGVD
701: NGSPGGKELL DRGISLHKMI RLITFTSGGR AYLNFMGNEF GHPERVEFPT QSNNFSFSLA NRRWDLLESG VHHHLFSFDK ELMDLDKSKG ILSRGLPSIH
801: HVNDANMVIS FSRGPFLFIF NFHPSNSYEK YDVGVEEAGE YTMILNSDEV KYGGQGIVTE DHYLQRSISK RIDGQRNCLE VFLPSRTAQV YKLTRILRI

Arabidopsis Description

SBE31,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic [Source:UniProtKB/Swiss-Prot;Acc:D2WL32]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.