Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 1
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035782.1-P | Field mustard | plastid | 89.32 | 89.62 |
| CDY29828 | Canola | plastid | 89.1 | 89.4 |
| CDY54647 | Canola | plastid | 89.1 | 89.4 |
| VIT_19s0090g00920.t01 | Wine grape | plastid | 72.19 | 72.43 |
| PGSC0003DMT400057446 | Potato | cytosol | 20.36 | 70.93 |
| Solyc07g064830.2.1 | Tomato | nucleus | 69.3 | 68.99 |
| KRG98710 | Soybean | plastid | 68.08 | 68.08 |
| GSMUA_Achr6P13530_001 | Banana | plastid | 64.18 | 63.55 |
| EES01041 | Sorghum | plastid | 61.74 | 61.26 |
| Os06t0367100-01 | Rice | plastid | 61.51 | 61.24 |
| TraesCS7D01G344000.1 | Wheat | plastid | 61.74 | 60.72 |
| TraesCS7B01G248000.1 | Wheat | plastid | 61.62 | 60.61 |
| TraesCS7A01G336400.1 | Wheat | plastid | 61.51 | 60.5 |
| Zm00001d011301_P001 | Maize | plastid | 60.07 | 60.07 |
| HORVU7Hr1G082830.1 | Barley | plastid | 48.05 | 59.75 |
| HORVU7Hr1G082850.6 | Barley | cytosol, plastid | 12.57 | 46.12 |
| AT5G03650.1 | Thale cress | plastid | 28.36 | 31.68 |
| AT2G36390.1 | Thale cress | plastid | 28.14 | 29.49 |
| Zm00001d033399_P001 | Maize | endoplasmic reticulum, vacuole | 0.67 | 5.13 |
Protein Annotations
| KEGG:00500+2.4.1.18 | Gene3D:2.60.40.10 | Gene3D:2.60.40.1180 | MapMan:3.2.2.5 | Gene3D:3.20.20.80 | EntrezGene:821589 |
| InterPro:A-amylase/branching_C | ProteinID:AEE76378.1 | ProteinID:AEE76379.1 | ProteinID:AEE76380.1 | EMBL:AK118785 | ArrayExpress:AT3G20440 |
| EnsemblPlantsGene:AT3G20440 | RefSeq:AT3G20440 | TAIR:AT3G20440 | RefSeq:AT3G20440-TAIR-G | EnsemblPlants:AT3G20440.2 | TAIR:AT3G20440.2 |
| Unigene:At.38239 | ProteinID:BAB02827.1 | InterPro:Branching_enzy | UniProt:D2WL32 | Symbol:EMB2729 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003844 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005975 | GO:GO:0005978 | GO:GO:0006091 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009501 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009570 |
| GO:GO:0009791 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0016757 | GO:GO:0019252 | GO:GO:0043169 |
| GO:GO:0102752 | EMBL:GQ374452 | InterPro:Glyco_hydro_13_cat_dom | InterPro:Glyco_hydro_b | InterPro:Glycoside_hydrolase_SF | InterPro:IPR013780 |
| InterPro:IPR013783 | InterPro:Ig-like_fold | RefSeq:NP_001154629.1 | RefSeq:NP_001189940.1 | RefSeq:NP_188679.2 | PFAM:PF00128 |
| PFAM:PF02806 | PIRSF:PIRSF000463 | PO:PO:0000003 | PO:PO:0000013 | PO:PO:0000014 | PO:PO:0000037 |
| PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007098 |
| PO:PO:0007115 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009049 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0025022 | PANTHER:PTHR43651 | PANTHER:PTHR43651:SF4 |
| SMART:SM00642 | SUPFAM:SSF51011 | SUPFAM:SSF51445 | UniParc:UPI0001A7B283 | SEG:seg | : |
Description
SBE31,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic [Source:UniProtKB/Swiss-Prot;Acc:D2WL32]
Coordinates
chr3:-:7123182..7130450
Molecular Weight (calculated)
103531.0 Da
IEP (calculated)
6.170
GRAVY (calculated)
-0.555
Length
899 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSLSNQTRF SFHPNNLVVS EKRRLGISGV NFPRKIKLKI TCFAAERPRQ EKQKKKSQSQ STSDAEAGVD PVGFLTRLGI ADRIFAQFLR ERHKALKDLK
101: DEIFKRHFDF RDFASGFELL GMHRHMEHRV DFMDWGPGSR YGAIIGDFNG WSPTENAARE GLFGHDDYGY WFIILEDKLR EGEEPDELYF QQYNYVDDYD
201: KGDSGVSAEE IFQKANDEYW EPGEDRFIKN RFEVPAKLYE QMFGPNSPQT LEELGDIPDA ETRYKQWKEE HKDDPPSNLP PCDIIDKGQG KPYDIFNVVT
301: SPEWTKKFYE KEPPIPYWLE TRKGRKAWLQ KYIPAVPHGS KYRLYFNTPD GPLERVPAWA TYVQPEDEGK QAYAIHWEPS PEAAYKWKYS KPKVPESLRI
401: YECHVGISGS EPKVSTFEEF TKKVLPHVKR AGYNAIQLIG VPEHKDYFTV GYRVTNFFAA SSRYGTPDDF KRLVDEAHGL GLLVFLDIVH SYAAADQMVG
501: LSLFDGSNDC YFHYGKRGHH KHWGTRMFKY GDLDVLHFLI SNLNWWITEY QVDGYQFHSL ASMIYTHNGF ASFNNDLDDY CNQYVDRDAL MYLILANEIL
601: HVQHPNIITI AEDATYYPGL CEPVSQGGLG FDYYVNLSAS EMWVSLLDNV PDNEWSMSKI VSTLVANKEY ADKMLSYAEN HNQSISGGRS FAEILFGGVD
701: NGSPGGKELL DRGISLHKMI RLITFTSGGR AYLNFMGNEF GHPERVEFPT QSNNFSFSLA NRRWDLLESG VHHHLFSFDK ELMDLDKSKG ILSRGLPSIH
801: HVNDANMVIS FSRGPFLFIF NFHPSNSYEK YDVGVEEAGE YTMILNSDEV KYGGQGIVTE DHYLQRSISK RIDGQRNCLE VFLPSRTAQV YKLTRILRI
101: DEIFKRHFDF RDFASGFELL GMHRHMEHRV DFMDWGPGSR YGAIIGDFNG WSPTENAARE GLFGHDDYGY WFIILEDKLR EGEEPDELYF QQYNYVDDYD
201: KGDSGVSAEE IFQKANDEYW EPGEDRFIKN RFEVPAKLYE QMFGPNSPQT LEELGDIPDA ETRYKQWKEE HKDDPPSNLP PCDIIDKGQG KPYDIFNVVT
301: SPEWTKKFYE KEPPIPYWLE TRKGRKAWLQ KYIPAVPHGS KYRLYFNTPD GPLERVPAWA TYVQPEDEGK QAYAIHWEPS PEAAYKWKYS KPKVPESLRI
401: YECHVGISGS EPKVSTFEEF TKKVLPHVKR AGYNAIQLIG VPEHKDYFTV GYRVTNFFAA SSRYGTPDDF KRLVDEAHGL GLLVFLDIVH SYAAADQMVG
501: LSLFDGSNDC YFHYGKRGHH KHWGTRMFKY GDLDVLHFLI SNLNWWITEY QVDGYQFHSL ASMIYTHNGF ASFNNDLDDY CNQYVDRDAL MYLILANEIL
601: HVQHPNIITI AEDATYYPGL CEPVSQGGLG FDYYVNLSAS EMWVSLLDNV PDNEWSMSKI VSTLVANKEY ADKMLSYAEN HNQSISGGRS FAEILFGGVD
701: NGSPGGKELL DRGISLHKMI RLITFTSGGR AYLNFMGNEF GHPERVEFPT QSNNFSFSLA NRRWDLLESG VHHHLFSFDK ELMDLDKSKG ILSRGLPSIH
801: HVNDANMVIS FSRGPFLFIF NFHPSNSYEK YDVGVEEAGE YTMILNSDEV KYGGQGIVTE DHYLQRSISK RIDGQRNCLE VFLPSRTAQV YKLTRILRI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.