Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G082850.6 | Barley | cytosol, plastid | 46.51 | 48.98 |
| Solyc07g064830.2.1 | Tomato | nucleus | 98.45 | 28.13 |
| VIT_19s0090g00920.t01 | Wine grape | plastid | 74.42 | 21.43 |
| CDY29828 | Canola | plastid | 71.32 | 20.54 |
| Bra035782.1-P | Field mustard | plastid | 70.93 | 20.42 |
| CDY54647 | Canola | plastid | 70.93 | 20.42 |
| AT3G20440.2 | Thale cress | plastid | 70.93 | 20.36 |
| KRG98710 | Soybean | plastid | 69.77 | 20.02 |
| GSMUA_Achr6P13530_001 | Banana | plastid | 62.79 | 17.84 |
| EES01041 | Sorghum | plastid | 56.59 | 16.11 |
| TraesCS7B01G248000.1 | Wheat | plastid | 56.2 | 15.86 |
| TraesCS7D01G344000.1 | Wheat | plastid | 56.2 | 15.86 |
| TraesCS7A01G336400.1 | Wheat | plastid | 55.43 | 15.65 |
| Zm00001d011301_P001 | Maize | plastid | 54.26 | 15.57 |
| Os06t0367100-01 | Rice | plastid | 53.88 | 15.39 |
| PGSC0003DMT400025846 | Potato | cytosol | 34.11 | 9.63 |
| HORVU7Hr1G082830.1 | Barley | plastid | 8.91 | 3.18 |
| Zm00001d033399_P001 | Maize | endoplasmic reticulum, vacuole | 0.0 | 0.0 |
Protein Annotations
| KEGG:00500+2.4.1.18 | Gene3D:2.60.40.1180 | MapMan:3.2.2.5 | Gene3D:3.20.20.80 | InterPro:A-amylase/branching_C | InterPro:Branching_enzy |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003844 | GO:GO:0005488 | GO:GO:0005975 | GO:GO:0005978 |
| GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 |
| GO:GO:0043169 | InterPro:Glyco_hydro_b | InterPro:Glycoside_hydrolase_SF | InterPro:IPR013780 | UniProt:M1C128 | PFAM:PF02806 |
| EnsemblPlantsGene:PGSC0003DMG400022307 | PGSC:PGSC0003DMG400022307 | EnsemblPlants:PGSC0003DMT400057446 | PANTHER:PTHR43651 | PANTHER:PTHR43651:SF4 | SUPFAM:SSF51011 |
| SUPFAM:SSF51445 | UniParc:UPI00029499BF | : | : | : | : |
Description
Starch branching enzyme [Source:PGSC_GENE;Acc:PGSC0003DMG400022307]
Coordinates
chr7:+:55034518..55039256
Molecular Weight (calculated)
29451.3 Da
IEP (calculated)
8.117
GRAVY (calculated)
-0.335
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MWLALLENTP DHEWCMSKIV STLVGDRQNT DKMLLYAENH NQSISGGRSF AEILIGNSLG KSSISQESLL RGCSLHKMIR LITSTIGGHA YLNFMGNEFG
101: HPKRVEFPMS SNNFSFSLAN RRWDLLEDVV HYQLFSFDKD MMDLDKNGRI LSRGLANIHH VNDTTMVISY LRGPNLFVFN FHPVNSYERY IIGVEEAGEY
201: QVTLNTDENK YGGRGLLGHD QNIQRTISRR ADGMRFCLEV PLPSRSAQVY KLTRILRA
101: HPKRVEFPMS SNNFSFSLAN RRWDLLEDVV HYQLFSFDKD MMDLDKNGRI LSRGLANIHH VNDTTMVISY LRGPNLFVFN FHPVNSYERY IIGVEEAGEY
201: QVTLNTDENK YGGRGLLGHD QNIQRTISRR ADGMRFCLEV PLPSRSAQVY KLTRILRA
001: MVSLSNQTRF SFHPNNLVVS EKRRLGISGV NFPRKIKLKI TCFAAERPRQ EKQKKKSQSQ STSDAEAGVD PVGFLTRLGI ADRIFAQFLR ERHKALKDLK
101: DEIFKRHFDF RDFASGFELL GMHRHMEHRV DFMDWGPGSR YGAIIGDFNG WSPTENAARE GLFGHDDYGY WFIILEDKLR EGEEPDELYF QQYNYVDDYD
201: KGDSGVSAEE IFQKANDEYW EPGEDRFIKN RFEVPAKLYE QMFGPNSPQT LEELGDIPDA ETRYKQWKEE HKDDPPSNLP PCDIIDKGQG KPYDIFNVVT
301: SPEWTKKFYE KEPPIPYWLE TRKGRKAWLQ KYIPAVPHGS KYRLYFNTPD GPLERVPAWA TYVQPEDEGK QAYAIHWEPS PEAAYKWKYS KPKVPESLRI
401: YECHVGISGS EPKVSTFEEF TKKVLPHVKR AGYNAIQLIG VPEHKDYFTV GYRVTNFFAA SSRYGTPDDF KRLVDEAHGL GLLVFLDIVH SYAAADQMVG
501: LSLFDGSNDC YFHYGKRGHH KHWGTRMFKY GDLDVLHFLI SNLNWWITEY QVDGYQFHSL ASMIYTHNGF ASFNNDLDDY CNQYVDRDAL MYLILANEIL
601: HVQHPNIITI AEDATYYPGL CEPVSQGGLG FDYYVNLSAS EMWVSLLDNV PDNEWSMSKI VSTLVANKEY ADKMLSYAEN HNQSISGGRS FAEILFGGVD
701: NGSPGGKELL DRGISLHKMI RLITFTSGGR AYLNFMGNEF GHPERVEFPT QSNNFSFSLA NRRWDLLESG VHHHLFSFDK ELMDLDKSKG ILSRGLPSIH
801: HVNDANMVIS FSRGPFLFIF NFHPSNSYEK YDVGVEEAGE YTMILNSDEV KYGGQGIVTE DHYLQRSISK RIDGQRNCLE VFLPSRTAQV YKLTRILRI
101: DEIFKRHFDF RDFASGFELL GMHRHMEHRV DFMDWGPGSR YGAIIGDFNG WSPTENAARE GLFGHDDYGY WFIILEDKLR EGEEPDELYF QQYNYVDDYD
201: KGDSGVSAEE IFQKANDEYW EPGEDRFIKN RFEVPAKLYE QMFGPNSPQT LEELGDIPDA ETRYKQWKEE HKDDPPSNLP PCDIIDKGQG KPYDIFNVVT
301: SPEWTKKFYE KEPPIPYWLE TRKGRKAWLQ KYIPAVPHGS KYRLYFNTPD GPLERVPAWA TYVQPEDEGK QAYAIHWEPS PEAAYKWKYS KPKVPESLRI
401: YECHVGISGS EPKVSTFEEF TKKVLPHVKR AGYNAIQLIG VPEHKDYFTV GYRVTNFFAA SSRYGTPDDF KRLVDEAHGL GLLVFLDIVH SYAAADQMVG
501: LSLFDGSNDC YFHYGKRGHH KHWGTRMFKY GDLDVLHFLI SNLNWWITEY QVDGYQFHSL ASMIYTHNGF ASFNNDLDDY CNQYVDRDAL MYLILANEIL
601: HVQHPNIITI AEDATYYPGL CEPVSQGGLG FDYYVNLSAS EMWVSLLDNV PDNEWSMSKI VSTLVANKEY ADKMLSYAEN HNQSISGGRS FAEILFGGVD
701: NGSPGGKELL DRGISLHKMI RLITFTSGGR AYLNFMGNEF GHPERVEFPT QSNNFSFSLA NRRWDLLESG VHHHLFSFDK ELMDLDKSKG ILSRGLPSIH
801: HVNDANMVIS FSRGPFLFIF NFHPSNSYEK YDVGVEEAGE YTMILNSDEV KYGGQGIVTE DHYLQRSISK RIDGQRNCLE VFLPSRTAQV YKLTRILRI
Arabidopsis Description
SBE31,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic [Source:UniProtKB/Swiss-Prot;Acc:D2WL32]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.