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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
  • vacuole 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G336400.1 Wheat plastid 83.28 82.28
TraesCS7D01G344000.1 Wheat plastid 83.17 82.17
TraesCS7B01G248000.1 Wheat plastid 82.83 81.84
EES01041 Sorghum plastid 80.95 80.68
Zm00001d011301_P001 Maize plastid 79.29 79.64
HORVU7Hr1G082830.1 Barley plastid 62.9 78.56
HORVU7Hr1G082850.6 Barley cytosol, plastid 18.94 69.8
GSMUA_Achr6P13530_001 Banana plastid 66.33 65.97
VIT_19s0090g00920.t01 Wine grape plastid 63.23 63.73
CDY29828 Canola plastid 61.35 61.83
AT3G20440.2 Thale cress plastid 61.24 61.51
Bra035782.1-P Field mustard plastid 60.69 61.16
CDY54647 Canola plastid 60.58 61.05
Solyc07g064830.2.1 Tomato nucleus 60.91 60.91
PGSC0003DMT400057446 Potato cytosol 15.39 53.88
Os06t0726400-01 Rice plastid 28.13 30.98
Os02t0528200-01 Rice plastid 27.57 30.18
Os04t0409200-00 Rice plastid 6.98 24.71
KRH56220 Soybean cytosol 1.66 19.74
Protein Annotations
KEGG:00500+2.4.1.18Gene3D:2.60.40.10Gene3D:2.60.40.1180MapMan:3.2.2.5Gene3D:3.20.20.80EntrezGene:4341008
InterPro:A-amylase/branching_CProteinID:BAD69144.1ProteinID:BAF19525.1ProteinID:BAS97723.1InterPro:Branching_enzyGO:GO:0003674
GO:GO:0003824GO:GO:0003844GO:GO:0004553GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005975GO:GO:0005978GO:GO:0006091GO:GO:0007275
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009507GO:GO:0009536GO:GO:0009791
GO:GO:0009987GO:GO:0016740GO:GO:0016787GO:GO:0043169InterPro:Glyco_hydro_13_NInterPro:Glyco_hydro_13_cat_dom
InterPro:Glyco_hydro_bInterPro:Glycoside_hydrolase_SFInterPro:IPR013780InterPro:IPR013783InterPro:Ig-like_foldInterPro:Ig_E-set
EnsemblPlantsGene:Os06g0367100EnsemblPlants:Os06t0367100-01PFAM:PF00128PFAM:PF02806PFAM:PF02922PIRSF:PIRSF000463
PANTHER:PTHR43651PANTHER:PTHR43651:SF4UniProt:Q5VN31SMART:SM00642SUPFAM:SSF51011SUPFAM:SSF51445
SUPFAM:SSF81296UniParc:UPI0000458084RefSeq:XP_015644349.1SEG:seg::
Description
Glycoside hydrolase, subgroup, catalytic core domain containing protein. (Os06t0367100-01);Similar to starch branching enzyme III. (Os06t0367100-02)
Coordinates
chr6:+:15335687..15365531
Molecular Weight (calculated)
103842.0 Da
IEP (calculated)
5.857
GRAVY (calculated)
-0.548
Length
903 amino acids
Sequence
(BLAST)
001: MDSCALFLST PRPPPPLVPA HRRRPLASRS GLRRREGCPC SCASSSSSSG RAGSQDRPPR PWQQKQRTQR PGRGEAIDPV GFLAKHGISD RAFAQFLRDR
101: YKALKDRRWE LHSRLIDLKE ASSGFELMGM HRHRQHRVDF MEWAPGARYC SVVGDFNQWS TTENCAREGH LGHDDFGYWT IILEDKLREG QEPDEYYFQE
201: YNYADDYDKG DNGVDVEELI HRMNEEYWEP GEIKSQKSRL EVVAKLYEQM FGPNGPQTEE ELGDIPDAET RYNEWKALQK DDSASSLPCY DIIDNGQEFD
301: IFNVATDRVS FEKFQGKSPP LAYWVEMRKG RKAWLEKYVP AISHKDKYRV YFNTPDGGLE RIPAWATYVL PDAEGKQSYA VHWDPPPEEI YKWRFERPKV
401: KGSLRIYECH VGISGSEQKI SSFQEFTSNV LPHIKDAGYN AIQLIGIVEH KDYSSVGYKV TNYFSVSSRF GSPDDFKKLV DEAHGLGLVV LLDIVHSYAS
501: ADELVGLSLF DGSNDCYFHS GKRGHHKYWG TRMFKYDDID VLHFLLSNLN WWVTEYRVDG FQFHSLPSML YTHNGFSTFT GATEEYYNQY VDEDALIYLI
601: IANEMLHELH PDIITIAEDA TFYPGLCEPT TQGGLGFDYW VNLSIPEMWL WHLENVPEQE WSMNKIMRVL VNNNSNMLSY VENHNQSISG RKSFAEIILY
701: EGKCSNSSVD NDLIFRASSL LNIIKLITFT TSGGAYLNFI GNEFAHPKRI EFPMSSNDYS FCLANRQWEL LDKGVHKHIF NFDKDIMSLD GKERLISGGS
801: PIVHHCDDTS MIIYFTRGPF LFVFNFNPDA SYQLYSVGVD EAGEYQLILN TDETKYGGRG ELTSNQYMKR TSDNRVGGCR NSLELTLPSR SAQVFKLVRI
901: LRI
Best Arabidopsis Sequence Match ( AT3G20440.2 )
(BLAST)
001: MVSLSNQTRF SFHPNNLVVS EKRRLGISGV NFPRKIKLKI TCFAAERPRQ EKQKKKSQSQ STSDAEAGVD PVGFLTRLGI ADRIFAQFLR ERHKALKDLK
101: DEIFKRHFDF RDFASGFELL GMHRHMEHRV DFMDWGPGSR YGAIIGDFNG WSPTENAARE GLFGHDDYGY WFIILEDKLR EGEEPDELYF QQYNYVDDYD
201: KGDSGVSAEE IFQKANDEYW EPGEDRFIKN RFEVPAKLYE QMFGPNSPQT LEELGDIPDA ETRYKQWKEE HKDDPPSNLP PCDIIDKGQG KPYDIFNVVT
301: SPEWTKKFYE KEPPIPYWLE TRKGRKAWLQ KYIPAVPHGS KYRLYFNTPD GPLERVPAWA TYVQPEDEGK QAYAIHWEPS PEAAYKWKYS KPKVPESLRI
401: YECHVGISGS EPKVSTFEEF TKKVLPHVKR AGYNAIQLIG VPEHKDYFTV GYRVTNFFAA SSRYGTPDDF KRLVDEAHGL GLLVFLDIVH SYAAADQMVG
501: LSLFDGSNDC YFHYGKRGHH KHWGTRMFKY GDLDVLHFLI SNLNWWITEY QVDGYQFHSL ASMIYTHNGF ASFNNDLDDY CNQYVDRDAL MYLILANEIL
601: HVQHPNIITI AEDATYYPGL CEPVSQGGLG FDYYVNLSAS EMWVSLLDNV PDNEWSMSKI VSTLVANKEY ADKMLSYAEN HNQSISGGRS FAEILFGGVD
701: NGSPGGKELL DRGISLHKMI RLITFTSGGR AYLNFMGNEF GHPERVEFPT QSNNFSFSLA NRRWDLLESG VHHHLFSFDK ELMDLDKSKG ILSRGLPSIH
801: HVNDANMVIS FSRGPFLFIF NFHPSNSYEK YDVGVEEAGE YTMILNSDEV KYGGQGIVTE DHYLQRSISK RIDGQRNCLE VFLPSRTAQV YKLTRILRI
Arabidopsis Description
SBE31,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic [Source:UniProtKB/Swiss-Prot;Acc:D2WL32]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.