Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plastid:
27992503
|
msms PMID:
27992503
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P16770_001 | Banana | cytosol, nucleus, plastid | 6.91 | 86.36 |
| GSMUA_Achr5P16760_001 | Banana | cytosol | 39.39 | 83.33 |
| EES06902 | Sorghum | plastid | 78.18 | 80.32 |
| HORVU2Hr1G077120.1 | Barley | plastid | 77.94 | 77.56 |
| TraesCS2B01G327300.4 | Wheat | golgi | 78.55 | 77.51 |
| TraesCS2D01G308600.1 | Wheat | plastid | 78.3 | 77.27 |
| TraesCS2A01G310300.2 | Wheat | plastid | 77.94 | 77.1 |
| Zm00001d016684_P005 | Maize | plastid | 75.03 | 77.09 |
| AT5G03650.1 | Thale cress | plastid | 69.09 | 70.81 |
| CDX70296 | Canola | plastid | 70.3 | 69.3 |
| CDY10367 | Canola | plastid | 69.82 | 68.82 |
| GSMUA_Achr6P07530_001 | Banana | mitochondrion | 70.67 | 68.43 |
| Bra009521.1-P | Field mustard | plastid | 70.06 | 67.92 |
| CDX84127 | Canola | plastid | 68.48 | 67.18 |
| VIT_08s0007g03750.t01 | Wine grape | plastid | 69.82 | 67.05 |
| Bra005269.1-P | Field mustard | plastid | 68.24 | 66.63 |
| CDX75040 | Canola | plastid | 68.12 | 66.51 |
| KRH67868 | Soybean | mitochondrion | 69.94 | 66.32 |
| AT2G36390.1 | Thale cress | plastid | 68.73 | 66.08 |
| KRG96156 | Soybean | mitochondrion | 68.61 | 65.06 |
| Solyc09g009190.2.1 | Tomato | plastid | 68.73 | 64.73 |
| Os04t0409200-00 | Rice | plastid | 19.64 | 63.53 |
| CDY43722 | Canola | plastid | 68.36 | 53.46 |
| Os06t0726400-01 | Rice | plastid | 49.45 | 49.76 |
| Os06t0367100-01 | Rice | plastid | 30.18 | 27.57 |
| GSMUA_Achr5P16780_001 | Banana | cytosol, nucleus, plastid | 7.03 | 26.13 |
Protein Annotations
| KEGG:00500+2.4.1.18 | Gene3D:2.60.40.10 | Gene3D:2.60.40.1180 | MapMan:3.2.2.5 | Gene3D:3.20.20.80 | InterPro:A-amylase/branching_C |
| UniProt:B3VDJ4 | InterPro:Branching_enzy | EMBL:EU735074 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003844 |
| GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005975 | GO:GO:0005978 | GO:GO:0006091 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0016757 | GO:GO:0016787 |
| GO:GO:0043169 | GO:GO:0102752 | InterPro:Glyco_hydro_13_N | InterPro:Glyco_hydro_13_cat_dom | InterPro:Glyco_hydro_b | InterPro:Glycoside_hydrolase_SF |
| InterPro:IPR013780 | InterPro:IPR013783 | InterPro:Ig-like_fold | InterPro:Ig_E-set | EnsemblPlantsGene:Os02g0528200 | EnsemblPlants:Os02t0528200-01 |
| PFAM:PF00128 | PFAM:PF02806 | PFAM:PF02922 | PIRSF:PIRSF000463 | PANTHER:PTHR43651 | PANTHER:PTHR43651:SF1 |
| SMART:SM00642 | SUPFAM:SSF51011 | SUPFAM:SSF51445 | SUPFAM:SSF81296 | UniParc:UPI000178799F | SEG:seg |
Description
STARCH BRANCHING ENZYME 3Starch branching enzyme 3, Starch synthesis (Os02t0528200-01)
Coordinates
chr2:-:19355790..19367127
Molecular Weight (calculated)
92748.1 Da
IEP (calculated)
5.991
GRAVY (calculated)
-0.416
Length
825 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAPASAVPG SAAGLRAGAV RFPVPAGARS WRAAAELPTS RSLLSGRRFP GAVRVGGSGG RVAVRAAGAS GEVMIPEGES DGMPVSAGSD DLQVPALDDE
101: LSTEVGAEVE IESSGASDVE GVKRVVEELA AEQKPRVVPP TGDGQKIFQM DSMLNGYKYH LEYRYSLYRR LRSDIDQYEG GLETFSRGYE KFGFNHSAEG
201: VTYREWAPGA HSAALVGDFN NWNPNADRMS KNEFGVWEIF LPNNADGSSP IPHGSRVKVR METPSGIKDS IPAWIKYSVQ AAGEIPYNGI YYDPPEEEKY
301: IFKHPQPKRP KSLRIYETHV GMSSTEPKIN TYANFRDEVL PRIKKLGYNA VQIMAIQEHA YYGSFGYHVT NFFAPSSRFG TPEDLKSLID KAHELGLVVL
401: MDVVHSHASN NTLDGLNGFD GTDTHYFHSG SRGHHWMWDS RLFNYGNWEV LRFLLSNARW WLEEYKFDGF RFDGVTSMMY THHGLQVAFT GNYSEYFGFA
501: TDADAVVYLM LVNDLIHGLY PEAITIGEDV SGMPTFALPV QDGGVGFDYR LHMAVPDKWI ELLKQSDESW KMGDIVHTLT NRRWSEKCVT YAESHDQALV
601: GDKTIAFWLM DKDMYDFMAL DRPATPSIDR GIALHKMIRL ITMGLGGEGY LNFMGNEFGH PEWIDFPRAP QVLPNGKFIP GNNNSYDKCR RRFDLGDADY
701: LRYRGMLEFD RAMQSLEEKY GFMTSDHQYI SRKHEEDKMI IFEKGDLVFV FNFHWSNSYF DYRVGCLKPG KYKVVLDSDA GLFGGFGRIH HTAEHFTADC
801: SHDNRPYSFS VYSPSRTCVV YAPAE
101: LSTEVGAEVE IESSGASDVE GVKRVVEELA AEQKPRVVPP TGDGQKIFQM DSMLNGYKYH LEYRYSLYRR LRSDIDQYEG GLETFSRGYE KFGFNHSAEG
201: VTYREWAPGA HSAALVGDFN NWNPNADRMS KNEFGVWEIF LPNNADGSSP IPHGSRVKVR METPSGIKDS IPAWIKYSVQ AAGEIPYNGI YYDPPEEEKY
301: IFKHPQPKRP KSLRIYETHV GMSSTEPKIN TYANFRDEVL PRIKKLGYNA VQIMAIQEHA YYGSFGYHVT NFFAPSSRFG TPEDLKSLID KAHELGLVVL
401: MDVVHSHASN NTLDGLNGFD GTDTHYFHSG SRGHHWMWDS RLFNYGNWEV LRFLLSNARW WLEEYKFDGF RFDGVTSMMY THHGLQVAFT GNYSEYFGFA
501: TDADAVVYLM LVNDLIHGLY PEAITIGEDV SGMPTFALPV QDGGVGFDYR LHMAVPDKWI ELLKQSDESW KMGDIVHTLT NRRWSEKCVT YAESHDQALV
601: GDKTIAFWLM DKDMYDFMAL DRPATPSIDR GIALHKMIRL ITMGLGGEGY LNFMGNEFGH PEWIDFPRAP QVLPNGKFIP GNNNSYDKCR RRFDLGDADY
701: LRYRGMLEFD RAMQSLEEKY GFMTSDHQYI SRKHEEDKMI IFEKGDLVFV FNFHWSNSYF DYRVGCLKPG KYKVVLDSDA GLFGGFGRIH HTAEHFTADC
801: SHDNRPYSFS VYSPSRTCVV YAPAE
001: MVVIHGVSLT PRFTLPSRPL NTGFNAGNST LSFFFKKHPL SRKIFAGKQS AEFDSSSQAI SASEKVLVPD NLDDDPRGFS QIFDLESQTM EYTEAVRTED
101: QTMNVVKERG VKPRIVPPPG DGKKIYEIDP MLRTYNNHLD YRYGQYKRLR EEIDKYEGGL EAFSRGYEKL GFSRSDAGIT YREWAPGAKA ASLIGDFNNW
201: NSNADIMTRN EFGVWEIFLP NNTDGSPAIP HGSRVKIRMD TPSGIKDSIP AWIKFSVQAP GEIPFNGIYY DPPEEEKYVF KHPQPKRPKS LRIYEAHVGM
301: SSTEPMVNTY ANFRDDVLPR IKKLGYNAVQ IMAIQEHSYY ASFGYHVTNF FAPSSRCGTP EELKSLIDRA HELGLVVLMD IVHSHASKNT LDGLNMFDGT
401: DAHYFHSGPR GYHWMWDSRL FNYGSWEVLR YLLSNARWWL EEYKFDGFRF DGVTSMMYTH HGLSVGFTGN YTEYFGLETD VDAVNYLMLV NDMIHGLYPE
501: AITVGEDVSG MPTFCIPVQD GGVGFDYRLH MAIADKWIEM LKKRDEDWQM GDIIYTLTNR RWSEKCISYA ESHDQALVGD KTIAFWLMDK DMYDFMAVDR
601: PSTPLIDRGI ALHKMIRLIT MGLGGEGYLN FMGNEFGHPE WIDFPRGEQR LSDGSVIPGN NFSYDKCRRR FDLGDADYLR YRGLQEFDQA MQHLEENYGF
701: MTSEHQFISR KDEADRVIVF ERGDLVFVFN FHWTSSYFDY RIGCSKPGKY KIVLDSDDPL FGGFNRLDRK AEYFTYDGLY DERPCSFMVY APCRTAVVYA
801: LANHD
101: QTMNVVKERG VKPRIVPPPG DGKKIYEIDP MLRTYNNHLD YRYGQYKRLR EEIDKYEGGL EAFSRGYEKL GFSRSDAGIT YREWAPGAKA ASLIGDFNNW
201: NSNADIMTRN EFGVWEIFLP NNTDGSPAIP HGSRVKIRMD TPSGIKDSIP AWIKFSVQAP GEIPFNGIYY DPPEEEKYVF KHPQPKRPKS LRIYEAHVGM
301: SSTEPMVNTY ANFRDDVLPR IKKLGYNAVQ IMAIQEHSYY ASFGYHVTNF FAPSSRCGTP EELKSLIDRA HELGLVVLMD IVHSHASKNT LDGLNMFDGT
401: DAHYFHSGPR GYHWMWDSRL FNYGSWEVLR YLLSNARWWL EEYKFDGFRF DGVTSMMYTH HGLSVGFTGN YTEYFGLETD VDAVNYLMLV NDMIHGLYPE
501: AITVGEDVSG MPTFCIPVQD GGVGFDYRLH MAIADKWIEM LKKRDEDWQM GDIIYTLTNR RWSEKCISYA ESHDQALVGD KTIAFWLMDK DMYDFMAVDR
601: PSTPLIDRGI ALHKMIRLIT MGLGGEGYLN FMGNEFGHPE WIDFPRGEQR LSDGSVIPGN NFSYDKCRRR FDLGDADYLR YRGLQEFDQA MQHLEENYGF
701: MTSEHQFISR KDEADRVIVF ERGDLVFVFN FHWTSSYFDY RIGCSKPGKY KIVLDSDDPL FGGFNRLDRK AEYFTYDGLY DERPCSFMVY APCRTAVVYA
801: LANHD
Arabidopsis Description
SBE2.21,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LZS3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.