Factsheet for Bra005269.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, vacuole
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	vacuole
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75040	Canola	plastid	93.96	93.96
AT2G36390.1	Thale cress	plastid	82.49	81.24
HORVU2Hr1G072500.34	Barley	cytosol	58.93	80.98
GSMUA_Achr5P16770_001	Banana	cytosol, nucleus, plastid	6.27	80.3
GSMUA_Achr5P16760_001	Banana	cytosol	37.04	80.26
Bra009521.1-P	Field mustard	plastid	72.07	71.56
OQU81503	Sorghum	plastid	68.52	70.01
VIT_08s0007g03750.t01	Wine grape	plastid	71.01	69.85
Solyc09g009190.2.1	Tomato	plastid	71.48	68.95
EES06902	Sorghum	plastid	65.33	68.74
TraesCS2D01G290800.4	Wheat	plastid	66.86	68.48
Os02t0528200-01	Rice	plastid	66.63	68.24
TraesCS2A01G293400.1	Wheat	plastid	66.75	68.12
KRH67868	Soybean	mitochondrion	70.06	68.05
GSMUA_Achr6P07530_001	Banana	mitochondrion	68.4	67.84
TraesCS2B01G309500.3	Wheat	plastid	66.39	67.75
Zm00001d016684_P005	Maize	plastid	63.08	66.38
KRG96156	Soybean	mitochondrion	68.28	66.32
TraesCS2B01G327300.4	Wheat	golgi	64.73	65.43
HORVU2Hr1G077120.1	Barley	plastid	64.02	65.26
TraesCS2D01G308600.1	Wheat	plastid	64.38	65.07
TraesCS2A01G310300.2	Wheat	plastid	63.91	64.75
Os04t0409200-00	Rice	plastid	17.87	59.22
Zm00001d003817_P002	Maize	plastid	66.75	51.93
Bra035782.1-P	Field mustard	plastid	29.11	27.46
GSMUA_Achr5P16780_001	Banana	cytosol, nucleus, plastid	6.75	25.68

Protein Annotations

KEGG:00500+2.4.1.18	Gene3D:2.60.40.10	Gene3D:2.60.40.1180	MapMan:3.2.2.5	Gene3D:3.20.20.80	InterPro:A-amylase/branching_C
EnsemblPlantsGene:Bra005269	EnsemblPlants:Bra005269.1	EnsemblPlants:Bra005269.1-P	InterPro:Branching_enzy	GO:GO:0003674	GO:GO:0003824
GO:GO:0003844	GO:GO:0004553	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005975	GO:GO:0005978	GO:GO:0005982	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009628
GO:GO:0009987	GO:GO:0016740	GO:GO:0016787	GO:GO:0019725	GO:GO:0043169	GO:GO:0071329
GO:GO:0071332	GO:GO:0071333	GO:GO:0071482	InterPro:Glyco_hydro_13_N	InterPro:Glyco_hydro_13_cat_dom	InterPro:Glyco_hydro_b
InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set	UniProt:M4CM32
PFAM:PF00128	PFAM:PF02806	PFAM:PF02922	PIRSF:PIRSF000463	PANTHER:PTHR43651	PANTHER:PTHR43651:SF1
SMART:SM00642	SUPFAM:SSF51011	SUPFAM:SSF51445	SUPFAM:SSF81296	UniParc:UPI0002547B93	SEG:seg

Description

AT2G36390 (E=0.0) SBE2.1, BE3 | SBE2.1 (starch branching enzyme 2.1); 1,4-alpha-glucan branching enzyme

Coordinates

chrA05:-:4424873..4430184

Molecular Weight (calculated)

96027.0 Da

IEP (calculated)

4.875

GRAVY (calculated)

-0.518

Length

845 amino acids

Sequence
(BLAST)

001: MVYTISGVRF PHLASIKNSS LPSFNDDRRT NAVTFSLRKD TRSSSGKIFA RKPSYDSESS SSIATTASEN LGSHQSDSSS AETQETLSEV TQVHDDVDAQ
101: KAETERQEQT STLSTSGGQS YNENIASMPD SLDQEVVQRK IPPPGDGKKI YDIDPMLKSY DGHLDYRYGQ YIKLREEIDK NEGGLEAFSR GYEIFGFTRS
201: ATGITYREWA PGAKAASLIG DFNNWNSKAD VMTRNEYGVW EIFLPNDADG SPAIPHGSRV KIRMDTTSGI KDSIPAWIKY SVQAPGEIPY DGVYYDPAEE
301: DKYVFKHPRP RKPTSLRIYE SHVGMSSTEP MINTYANFRD DVLPRIKKLG YNAVQIMAIQ EHSYYASFGY HVTNFFAPSS RFGTPDDLKS LIDKAHELGL
401: VVLMDIVHSH ASKNTLDGLN MFDGTDGQYF HSGERGYHWM WDSRLFNYGS WEVLRYLLSN ARWWLEEYKF DGFRFDGVTS MMYTHHGLQV EFTGNYNEYF
501: GYSTDVDAVV YLMLVNDMIH GLYPEAIVVG EDVSGMPAFC IPVEDGGVGF DYRLHMAVAD KWIELLKKRD EDWQVGDIVF TLTNRRWGEK CVVYAESHDQ
601: ALVGDKTIAF WLMDKDMYDF MAVDKQATPR VDRGIALHKM IRLITMGLGG EGYLNFMGNE FGHPEWIDFP RTDQHLPDGR VIPGNNGSYD KCRRRFDLGD
701: AEYLRYHGLQ EFDRAMQHLE EKYGFMTSEH QYISRKDEGD RVIVFEKGNL VFVFNFHWTN SYSDYRIGCS VPGKYKIVLD SDDSSFGGFN RLDDSAEFFT
801: SDGKYDDRPC SLMVYAPCRT AVVYAAVDGD EDSSLVPISL VPDDV

Best Arabidopsis Sequence Match ( AT2G36390.1 )
(BLAST)

001: MVYTISGVRF PHLPSIKKKN SSLHSFNEDL RRSNAVSFSL RKDSRSSGKV FARKPSYDSD SSSLATTASE KLRGHQSDSS SSASDQVQSR DTVSDDTQVL
101: GNVDVQKTEE AQETETLDQT SALSTSGSIS YKEDFAKMSH SVDQEVGQRK IPPPGDGKRI YDIDPMLNSH RNHLDYRYGQ YRKLREEIDK NEGGLEAFSR
201: GYEIFGFTRS ATGITYREWA PGAKAASLIG DFNNWNAKSD VMARNDFGVW EIFLPNNADG SPAIPHGSRV KIRMDTPSGI KDSIPAWIKY SVQPPGEIPY
301: NGVYYDPPEE DKYAFKHPRP KKPTSLRIYE SHVGMSSTEP KINTYANFRD DVLPRIKKLG YNAVQIMAIQ EHAYYASFGY HVTNFFAPSS RFGTPDDLKS
401: LIDKAHELGL VVLMDIVHSH ASKNTLDGLD MFDGTDGQYF HSGSRGYHWM WDSRLFNYGS WEVLRYLLSN ARWWLEEYKF DGFRFDGVTS MMYTHHGLQV
501: EFTGNYNEYF GYSTDVDAVV YLMLVNDLIH GLYPEAIVVG EDVSGMPAFC VPVEDGGVGF DYRLHMAVAD KWIELLKKRD EDWQVGDITF TLTNRRWGEK
601: CVVYAESHDQ ALVGDKTIAF WLMDKDMYDF MAVDRQATPR VDRGIALHKM IRLITMGLGG EGYLNFMGNE FGHPEWIDFP RTDQHLPDGR VIAGNNGSYD
701: KCRRRFDLGD AEYLRYHGLQ EFDRAMQNLE ETYGFMTSEH QYISRKDEGD RVIVFERGNL LFVFNFHWTN SYSDYRIGCS VPGKYKIVLD SDNSLFGGFN
801: RLDDSAEFFT SDGRHDDRPC SFMVYAPCRT AVVYAAVDDD DDDERSSLVP IGLLPEDV

Arabidopsis Description

SBE2.1SBE2.1 [Source:UniProtKB/TrEMBL;Acc:A0A178VXI8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.