Factsheet for Zm00001d016684_P005

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P16770_001	Banana	cytosol, nucleus, plastid	7.22	87.88
EES06902	Sorghum	plastid	82.69	82.69
GSMUA_Achr5P16760_001	Banana	cytosol	38.85	80.0
Os02t0528200-01	Rice	plastid	77.09	75.03
TraesCS2B01G327300.4	Wheat	golgi	74.97	72.01
HORVU2Hr1G077120.1	Barley	plastid	74.22	71.89
TraesCS2D01G308600.1	Wheat	plastid	74.72	71.77
TraesCS2A01G310300.2	Wheat	plastid	74.22	71.46
AT5G03650.1	Thale cress	plastid	68.37	68.2
CDX70296	Canola	plastid	68.62	65.83
CDY10367	Canola	plastid	68.49	65.71
Bra009521.1-P	Field mustard	plastid	68.74	64.86
GSMUA_Achr6P07530_001	Banana	mitochondrion	68.74	64.79
KRH67868	Soybean	mitochondrion	68.74	63.45
VIT_08s0007g03750.t01	Wine grape	plastid	67.87	63.45
CDX84127	Canola	plastid	66.25	63.26
CDX75040	Canola	plastid	66.38	63.08
Bra005269.1-P	Field mustard	plastid	66.38	63.08
Zm00001d036363_P001	Maize	plastid	21.79	62.72
KRG96156	Soybean	mitochondrion	67.75	62.53
Solyc09g009190.2.1	Tomato	plastid	68.0	62.33
AT2G36390.1	Thale cress	plastid	66.13	61.89
Zm00001d003817_P002	Maize	plastid	71.48	52.85
CDY43722	Canola	plastid	65.88	50.14
Zm00001d014844_P005	Maize	plastid	48.69	47.51
Zm00001d011301_P001	Maize	plastid	29.51	26.36
GSMUA_Achr5P16780_001	Banana	cytosol, nucleus, plastid	6.6	23.87
Zm00001d033399_P001	Maize	endoplasmic reticulum, vacuole	0.75	5.13

Protein Annotations

KEGG:00500+2.4.1.18	Gene3D:2.60.40.10	Gene3D:2.60.40.1180	MapMan:3.2.2.5	InterPro:A-amylase/branching_C	UniProt:A0A1D6H9Q8
ProteinID:AQK71445.1	InterPro:Branching_enzy	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0003844
GO:GO:0004553	GO:GO:0005488	GO:GO:0005975	GO:GO:0005978	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0016787	GO:GO:0043169
InterPro:Glyco_hydro_13_N	InterPro:Glyco_hydro_13_cat_dom	InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	InterPro:IPR013783
InterPro:Ig-like_fold	InterPro:Ig_E-set	PFAM:PF00128	PFAM:PF02806	PFAM:PF02922	PIRSF:PIRSF000463
PANTHER:PTHR43651	PANTHER:PTHR43651:SF1	SMART:SM00642	SUPFAM:SSF51011	SUPFAM:SSF51445	SUPFAM:SSF81296
UniParc:UPI000844D0F2	EnsemblPlantsGene:Zm00001d016684	EnsemblPlants:Zm00001d016684_P005	EnsemblPlants:Zm00001d016684_T005	SEG:seg	:

Description

amylose extender11%2C4-alpha-glucan-branching enzyme 2%2C chloroplastic/amyloplastic

Coordinates

chr5:-:172412996..172430415

Molecular Weight (calculated)

90987.3 Da

IEP (calculated)

6.177

GRAVY (calculated)

-0.381

Length

803 amino acids

Sequence
(BLAST)

001: MAFAVSGAVL GGAVRAPRLT GGGEGSLVFR HTGLFLTRGA RVGCSGTHGA MRAAAAARKA VMVPEGENDG LASRADSAQF QSDELEVPDI SEETTCGAGV
101: ADAQALNRVR VVPPPSDGQK IFQIDPMLQG YKYHLEYRYS LYRRIRSDID EHEGGLEAFS RSYEKFGFNR SAEGITYREW APGAFSAALV GDFNNWDPNA
201: DRMSKVRMDT PSGIKDSIPA WIKYSVQAPG EIPYDGIYYD PPEEVKYVFR HAQPKRPKSL RIYETHVGMS SPEPKINTYV NFRDEVLPRI KKLGYNAVQI
301: MAIQEHSYYG SFGYHVTNFF APSSRFGTPE ELKSLIDRAH ELGLLVLMDV VHSHASSNTL DGLNGFDGTD THYFHSGPRG HHWMWDSRLF NYGNWEVLRF
401: LLSNARWWLE EYKFDGFRFD GVTSMMYTHH GLQVTFTGNF NEYFGFATDV DAVVYLMLVN DLIHGLYPEA VTIGEDVSAE WIGSQLEALP TKLLFDSQFS
501: CSVVQSNVSG MPTFALPVHD GGVGFDYRMH MAVADKWIDL LKQSDETWKM GDIVHTLTNR RWLEKCVTYA ESHDQALVGD KTIAFWLMDK DMYDFMALDR
601: PSTPTIDRGI ALHKMIRLIT MGLGGEGYLN FMGNEFGHPE WIDFPRGPQR LPSGKFIPGN NNSYDKCRRR FDLGDADYLR YHGMQEFDQA MQHLEQKYEF
701: MTSDHQYISR KHEEDKVIVF EKGDLVFVFN FHCNNSYFDY RIGCRKPGVY KVVLDSDAGL FGGFSRIHHA AEHFTADCSH DNRPYSFSVY TPSRTCVVYA
801: PVE

Best Arabidopsis Sequence Match ( AT2G36390.1 )
(BLAST)

001: MVYTISGVRF PHLPSIKKKN SSLHSFNEDL RRSNAVSFSL RKDSRSSGKV FARKPSYDSD SSSLATTASE KLRGHQSDSS SSASDQVQSR DTVSDDTQVL
101: GNVDVQKTEE AQETETLDQT SALSTSGSIS YKEDFAKMSH SVDQEVGQRK IPPPGDGKRI YDIDPMLNSH RNHLDYRYGQ YRKLREEIDK NEGGLEAFSR
201: GYEIFGFTRS ATGITYREWA PGAKAASLIG DFNNWNAKSD VMARNDFGVW EIFLPNNADG SPAIPHGSRV KIRMDTPSGI KDSIPAWIKY SVQPPGEIPY
301: NGVYYDPPEE DKYAFKHPRP KKPTSLRIYE SHVGMSSTEP KINTYANFRD DVLPRIKKLG YNAVQIMAIQ EHAYYASFGY HVTNFFAPSS RFGTPDDLKS
401: LIDKAHELGL VVLMDIVHSH ASKNTLDGLD MFDGTDGQYF HSGSRGYHWM WDSRLFNYGS WEVLRYLLSN ARWWLEEYKF DGFRFDGVTS MMYTHHGLQV
501: EFTGNYNEYF GYSTDVDAVV YLMLVNDLIH GLYPEAIVVG EDVSGMPAFC VPVEDGGVGF DYRLHMAVAD KWIELLKKRD EDWQVGDITF TLTNRRWGEK
601: CVVYAESHDQ ALVGDKTIAF WLMDKDMYDF MAVDRQATPR VDRGIALHKM IRLITMGLGG EGYLNFMGNE FGHPEWIDFP RTDQHLPDGR VIAGNNGSYD
701: KCRRRFDLGD AEYLRYHGLQ EFDRAMQNLE ETYGFMTSEH QYISRKDEGD RVIVFERGNL LFVFNFHWTN SYSDYRIGCS VPGKYKIVLD SDNSLFGGFN
801: RLDDSAEFFT SDGRHDDRPC SFMVYAPCRT AVVYAAVDDD DDDERSSLVP IGLLPEDV

Arabidopsis Description

SBE2.1SBE2.1 [Source:UniProtKB/TrEMBL;Acc:A0A178VXI8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.