CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75040	Canola	plastid	67.77	84.62
CDX84127	Canola	plastid	67.3	84.42
GSMUA_Achr5P16770_001	Banana	cytosol, nucleus, plastid	5.21	83.33
HORVU2Hr1G072500.34	Barley	cytosol	47.3	81.14
GSMUA_Achr5P16760_001	Banana	cytosol	29.86	80.77
AT2G36390.1	Thale cress	plastid	64.93	79.84
CDX70296	Canola	plastid	58.39	73.6
CDY10367	Canola	plastid	57.91	73.0
OQU81503	Sorghum	plastid	54.98	70.13
Solyc09g009190.2.1	Tomato	plastid	57.82	69.63
VIT_08s0007g03750.t01	Wine grape	plastid	56.59	69.5
EES06902	Sorghum	plastid	52.32	68.74
Os02t0528200-01	Rice	plastid	53.46	68.36
KRH67868	Soybean	mitochondrion	56.3	68.28
TraesCS2D01G290800.4	Wheat	plastid	53.36	68.24
TraesCS2B01G309500.3	Wheat	plastid	53.46	68.12
TraesCS2A01G293400.1	Wheat	plastid	53.46	68.12
GSMUA_Achr6P07530_001	Banana	mitochondrion	54.5	67.49
KRG96156	Soybean	mitochondrion	54.98	66.67
Zm00001d016684_P005	Maize	plastid	50.14	65.88
TraesCS2B01G327300.4	Wheat	golgi	51.85	65.43
HORVU2Hr1G077120.1	Barley	plastid	51.28	65.26
TraesCS2D01G308600.1	Wheat	plastid	51.66	65.19
TraesCS2A01G310300.2	Wheat	plastid	51.28	64.87
Os04t0409200-00	Rice	plastid	14.12	58.43
Zm00001d003817_P002	Maize	plastid	54.12	52.58
GSMUA_Achr5P16780_001	Banana	cytosol, nucleus, plastid	5.88	27.93
CDY54647	Canola	plastid	23.7	27.9
CDY29828	Canola	plastid	23.7	27.9

Protein Annotations

KEGG:00500+2.4.1.18	Gene3D:2.60.40.10	Gene3D:2.60.40.1180	MapMan:3.2.2.5	Gene3D:3.20.20.80	InterPro:A-amylase/branching_C
GO:A0A078I0V1	UniProt:A0A078I0V1	InterPro:Branching_enzy	EnsemblPlants:CDY43722	ProteinID:CDY43722	ProteinID:CDY43722.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0003844	GO:GO:0004553	GO:GO:0005488	GO:GO:0005975
GO:GO:0005978	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016740	GO:GO:0016787	GO:GO:0043169	EnsemblPlantsGene:GSBRNA2T00077208001	InterPro:Glyco_hydro_13_N	InterPro:Glyco_hydro_13_cat_dom
InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set
PFAM:PF00128	PFAM:PF02806	PFAM:PF02922	PANTHER:PTHR43651	PANTHER:PTHR43651:SF1	MetaCyc:PWY-5067
MetaCyc:PWY-622	SMART:SM00642	SUPFAM:SSF51011	SUPFAM:SSF51445	SUPFAM:SSF81296	UniParc:UPI0004EE937A
SEG:seg	:	:	:	:	:

Description

BnaAnng07370DBnaAnng07370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I0V1]

Coordinates

chrLK032567:-:43738..51526

Molecular Weight (calculated)

119883.0 Da

IEP (calculated)

5.059

GRAVY (calculated)

-0.467

Length

1055 amino acids

Sequence
(BLAST)

0001: MVYTMSGVRF AHLPSIKSSS LPTFNDDRRG NAVSFSLRKD TRSSGKIFGR KPSSDSESSS LATTPSEKLG GHQSDSSSAV TGHVEPLETV SQDTTQVLDD
0101: VHAQRIETEG QDTSGSMSES FVQEVGQRRI PPPGDGKKIY DIDPMLKSHN GHLDYRYGQY IKLREQIDKN EGGLEAFSRG YEIFGFTRSA TGITYREWAP
0201: GAKAASLIGD FNNWNSKVDV MSRNEFGVWE IFLPNNADGS PAIPHGSRVK IRMDTPTGIK DSIPAWIKYS VQAPGEIPYN GVYYDPAEEE KYVFKHPRPR
0301: KPTSLRIYES HVGMSSTEPM INTYANFRDD VLPRIKKLGY NAVQIMAIQE HSYYASFGYH VTNFFAPSSR FGTPDDLKSL IDKAHELGLV VLMDIVHSHA
0401: SKNTLDGLNM FDGTDGQYFH SGERGYHWMW DSRLFNYGSW EVLRYLLSNA RWWLEEYKFD GFRFDGVTSM MYTHHGLQVE FTGNYSEYFG YSTDVDAVVY
0501: LMLVNDMIHG LYPEAIVVGE DVSGMPAFCI PVQDGGVGFD YRLHMAVADK WIELLKKRDE DWQVGDIVFT LTNRRWGEKC VVYAESHDQA LVGDKTIAFW
0601: LMDKDMYDFM AVDGQATPRV DRGIALHKMI RLVTMGLGGE GYLNFMGNEF GHPEWIDFPR TDQHLPDGRV IPGNNASYDK CRRRFDLGDA EYLRYHGLQE
0701: FDRAMQHLEE KYGFMTSEHL YISRKDEGDR VIVFERGSLV FVFNFHWTNS YSDYRIGCSV PGKYKIVLDS DGSLFGGFNR LDDSAEFFTS DGRYDDRPCS
0801: LMVYAPCRTA VVYAAVDGDE DSISLVPEDD MYDFMAVDGQ ATPRVDRGIA LHKMIRLVTM GLGGEGYLNF MGNEFGHPEW IDFPRTDQHL PDGRVIPGNN
0901: ASYDKCRRRF DLGDAEYLRY HGLQEFDRAM QHLEEKYGFM TSEHLYISRK DEGDRVIVFE RGSLVFVFNF HWTNSYSDYR IGCSVPGKYK IVLDSDGSLF
1001: GGFNRLDDSA EFFTSDGRYD DRPCSLMVYA PCRTAVVYAA VDGDEDSISL VPEDV

Best Arabidopsis Sequence Match ( AT2G36390.1 )
(BLAST)

001: MVYTISGVRF PHLPSIKKKN SSLHSFNEDL RRSNAVSFSL RKDSRSSGKV FARKPSYDSD SSSLATTASE KLRGHQSDSS SSASDQVQSR DTVSDDTQVL
101: GNVDVQKTEE AQETETLDQT SALSTSGSIS YKEDFAKMSH SVDQEVGQRK IPPPGDGKRI YDIDPMLNSH RNHLDYRYGQ YRKLREEIDK NEGGLEAFSR
201: GYEIFGFTRS ATGITYREWA PGAKAASLIG DFNNWNAKSD VMARNDFGVW EIFLPNNADG SPAIPHGSRV KIRMDTPSGI KDSIPAWIKY SVQPPGEIPY
301: NGVYYDPPEE DKYAFKHPRP KKPTSLRIYE SHVGMSSTEP KINTYANFRD DVLPRIKKLG YNAVQIMAIQ EHAYYASFGY HVTNFFAPSS RFGTPDDLKS
401: LIDKAHELGL VVLMDIVHSH ASKNTLDGLD MFDGTDGQYF HSGSRGYHWM WDSRLFNYGS WEVLRYLLSN ARWWLEEYKF DGFRFDGVTS MMYTHHGLQV
501: EFTGNYNEYF GYSTDVDAVV YLMLVNDLIH GLYPEAIVVG EDVSGMPAFC VPVEDGGVGF DYRLHMAVAD KWIELLKKRD EDWQVGDITF TLTNRRWGEK
601: CVVYAESHDQ ALVGDKTIAF WLMDKDMYDF MAVDRQATPR VDRGIALHKM IRLITMGLGG EGYLNFMGNE FGHPEWIDFP RTDQHLPDGR VIAGNNGSYD
701: KCRRRFDLGD AEYLRYHGLQ EFDRAMQNLE ETYGFMTSEH QYISRKDEGD RVIVFERGNL LFVFNFHWTN SYSDYRIGCS VPGKYKIVLD SDNSLFGGFN
801: RLDDSAEFFT SDGRHDDRPC SFMVYAPCRT AVVYAAVDDD DDDERSSLVP IGLLPEDV

Arabidopsis Description

SBE2.1SBE2.1 [Source:UniProtKB/TrEMBL;Acc:A0A178VXI8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.