Factsheet for GSMUA_Achr6P07530_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P16770_001	Banana	cytosol, nucleus, plastid	7.51	96.97
GSMUA_Achr5P16760_001	Banana	cytosol	41.31	90.26
HORVU2Hr1G072500.34	Barley	cytosol	61.85	85.69
OQU81503	Sorghum	plastid	72.3	74.49
AT5G03650.1	Thale cress	plastid	69.48	73.54
TraesCS2D01G290800.4	Wheat	plastid	70.66	72.97
TraesCS2B01G309500.3	Wheat	plastid	70.54	72.58
TraesCS2A01G293400.1	Wheat	plastid	70.54	72.58
VIT_08s0007g03750.t01	Wine grape	plastid	73.12	72.53
EES06902	Sorghum	plastid	66.9	70.98
CDX70296	Canola	plastid	69.6	70.85
Os02t0528200-01	Rice	plastid	68.43	70.67
CDY10367	Canola	plastid	69.25	70.49
KRH67868	Soybean	mitochondrion	71.48	70.0
Bra009521.1-P	Field mustard	plastid	69.37	69.45
Solyc09g009190.2.1	Tomato	plastid	71.13	69.18
TraesCS2B01G327300.4	Wheat	golgi	67.49	68.78
HORVU2Hr1G077120.1	Barley	plastid	66.9	68.76
Zm00001d016684_P005	Maize	plastid	64.79	68.74
Bra005269.1-P	Field mustard	plastid	67.84	68.4
KRG96156	Soybean	mitochondrion	69.84	68.39
TraesCS2D01G308600.1	Wheat	plastid	67.02	68.3
CDX75040	Canola	plastid	67.72	68.28
TraesCS2A01G310300.2	Wheat	plastid	66.43	67.87
CDX84127	Canola	plastid	66.9	67.78
AT2G36390.1	Thale cress	plastid	67.61	67.13
Os04t0409200-00	Rice	plastid	18.54	61.96
Zm00001d003817_P002	Maize	plastid	70.19	55.06
CDY43722	Canola	plastid	67.49	54.5
GSMUA_Achr5P16780_001	Banana	cytosol, nucleus, plastid	13.73	52.7
GSMUA_Achr4P04690_001	Banana	cytoskeleton, cytosol, vacuole	44.13	46.77
GSMUA_Achr6P13530_001	Banana	plastid	31.22	29.3

Protein Annotations

KEGG:00500+2.4.1.18	Gene3D:2.60.40.10	Gene3D:2.60.40.1180	MapMan:3.2.2.5	Gene3D:3.20.20.80	InterPro:A-amylase/branching_C
InterPro:Branching_enzy	GO:GO:0003674	GO:GO:0003824	GO:GO:0003844	GO:GO:0004553	GO:GO:0005488
GO:GO:0005975	GO:GO:0005978	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	GO:GO:0016787	GO:GO:0043169	EnsemblPlantsGene:GSMUA_Achr6G07530_001	EnsemblPlants:GSMUA_Achr6P07530_001
EnsemblPlants:GSMUA_Achr6T07530_001	InterPro:Glyco_hydro_13_N	InterPro:Glyco_hydro_13_cat_dom	InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780
InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set	UniProt:M0T502	PFAM:PF00128	PFAM:PF02806
PFAM:PF02922	PIRSF:PIRSF000463	PANTHER:PTHR43651	PANTHER:PTHR43651:SF1	SMART:SM00642	SUPFAM:SSF51011
SUPFAM:SSF51445	SUPFAM:SSF81296	UniParc:UPI000296D919	SEG:seg	:	:

Description

1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic [Source:GMGC_GENE;Acc:GSMUA_Achr6G07530_001]

Coordinates

chr6:+:5091550..5120520

Molecular Weight (calculated)

96832.0 Da

IEP (calculated)

5.911

GRAVY (calculated)

-0.483

Length

852 amino acids

Sequence
(BLAST)

001: MAFTLAGIRL PTVRTSRLSA RSGFQAEQGR RAADLAFLSR KPIKVPFLGS SSDADPAYTT VSATGKVLVP GTESDDVPSS TLPTSNTEAA SSNLQCLNSL
101: SNKPNFAINN LIYKSFEDKV EPDAGQTSTA SELTGAESTS EGDKGTNSSQ AKERVEDVEE KPRCVPSPGS GRRIYEIDPL LKGHRSHLDY RYNQYKKMRE
201: MIDQYEGSLD AFSRGYEKFG FKRSASGVTY QEWAPGAKWA TLIGDFNNWN PNTNVMTQNE YGVWEVFLPN HADGSPPIPH GSRVKIRMDT PSGIKDSIPA
301: WIKYSVQAPG EIPYNGIYYD PPEEEKYVFQ HPQPKAPKSL RIYESHVGMS SPEPKINTYA SFRDDVLPRI KRLGYNAVQI MAIQEHSYYA SFGYHVTNFF
401: APSSRFGTPD ELKSLIDRAH ELGLLVLMDI VHSHASNNVL DGLNQFDGTD SHYFHPGPRG HHWMWDSRLF NYGSWEVLRF LLSNARWWLE EYKFDGFRFD
501: GVTSMMYIHH GLAVGFTGNY NEYFGYATDV DAVVYLMLVN EMIHGLYPEA VTIGEDVSGM PTFCIPIRDG GIGFDYRLHM AIPDKWIEIM KLNDEDWKMG
601: EIVSTLTNRR WLEKCVAYAE SHDQALVGDK TIAFWLMDKD MYDFMALDRP STPRIDRGIA LHKMIRLVTM GLGGEGYLNF MGNEFGHPEW IDFPRGVQHL
701: PNGKVIPGNN NSYDKCRRMF DLGDADYLRY RGMQEFDQAM QHLEDKYGFM TSDQYISRMD EGDKMIVFER GDLVFVFNFH WTNSYFDYRV GCLKPGKYKV
801: VLDSDDKLFG GFNRIDHTAE YFSTDGSYDN RPRSFLVYAP SRTVVVYALS VD

Best Arabidopsis Sequence Match ( AT5G03650.1 )
(BLAST)

001: MVVIHGVSLT PRFTLPSRPL NTGFNAGNST LSFFFKKHPL SRKIFAGKQS AEFDSSSQAI SASEKVLVPD NLDDDPRGFS QIFDLESQTM EYTEAVRTED
101: QTMNVVKERG VKPRIVPPPG DGKKIYEIDP MLRTYNNHLD YRYGQYKRLR EEIDKYEGGL EAFSRGYEKL GFSRSDAGIT YREWAPGAKA ASLIGDFNNW
201: NSNADIMTRN EFGVWEIFLP NNTDGSPAIP HGSRVKIRMD TPSGIKDSIP AWIKFSVQAP GEIPFNGIYY DPPEEEKYVF KHPQPKRPKS LRIYEAHVGM
301: SSTEPMVNTY ANFRDDVLPR IKKLGYNAVQ IMAIQEHSYY ASFGYHVTNF FAPSSRCGTP EELKSLIDRA HELGLVVLMD IVHSHASKNT LDGLNMFDGT
401: DAHYFHSGPR GYHWMWDSRL FNYGSWEVLR YLLSNARWWL EEYKFDGFRF DGVTSMMYTH HGLSVGFTGN YTEYFGLETD VDAVNYLMLV NDMIHGLYPE
501: AITVGEDVSG MPTFCIPVQD GGVGFDYRLH MAIADKWIEM LKKRDEDWQM GDIIYTLTNR RWSEKCISYA ESHDQALVGD KTIAFWLMDK DMYDFMAVDR
601: PSTPLIDRGI ALHKMIRLIT MGLGGEGYLN FMGNEFGHPE WIDFPRGEQR LSDGSVIPGN NFSYDKCRRR FDLGDADYLR YRGLQEFDQA MQHLEENYGF
701: MTSEHQFISR KDEADRVIVF ERGDLVFVFN FHWTSSYFDY RIGCSKPGKY KIVLDSDDPL FGGFNRLDRK AEYFTYDGLY DERPCSFMVY APCRTAVVYA
801: LANHD

Arabidopsis Description

SBE2.21,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LZS3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.