CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
vacuole 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005269.1-P	Field mustard	plastid	93.96	93.96
CDX84127	Canola	plastid	86.51	86.92
HORVU2Hr1G072500.34	Barley	cytosol	59.17	81.3
AT2G36390.1	Thale cress	plastid	82.25	81.0
GSMUA_Achr5P16770_001	Banana	cytosol, nucleus, plastid	6.27	80.3
GSMUA_Achr5P16760_001	Banana	cytosol	36.92	80.0
CDX70296	Canola	plastid	72.43	73.12
CDY10367	Canola	plastid	71.36	72.04
OQU81503	Sorghum	plastid	68.76	70.25
VIT_08s0007g03750.t01	Wine grape	plastid	70.41	69.27
EES06902	Sorghum	plastid	65.33	68.74
Solyc09g009190.2.1	Tomato	plastid	71.24	68.72
TraesCS2B01G309500.3	Wheat	plastid	66.98	68.36
TraesCS2D01G290800.4	Wheat	plastid	66.63	68.24
Os02t0528200-01	Rice	plastid	66.51	68.12
KRH67868	Soybean	mitochondrion	70.06	68.05
TraesCS2A01G293400.1	Wheat	plastid	66.63	68.0
CDY43722	Canola	plastid	84.62	67.77
GSMUA_Achr6P07530_001	Banana	mitochondrion	68.28	67.72
Zm00001d016684_P005	Maize	plastid	63.08	66.38
KRG96156	Soybean	mitochondrion	68.28	66.32
TraesCS2B01G327300.4	Wheat	golgi	65.21	65.91
TraesCS2D01G308600.1	Wheat	plastid	64.73	65.43
HORVU2Hr1G077120.1	Barley	plastid	64.14	65.38
TraesCS2A01G310300.2	Wheat	plastid	64.38	65.23
Os04t0409200-00	Rice	plastid	17.63	58.43
Zm00001d003817_P002	Maize	plastid	66.86	52.03
CDY54647	Canola	plastid	29.23	27.57
CDY29828	Canola	plastid	29.23	27.57
GSMUA_Achr5P16780_001	Banana	cytosol, nucleus, plastid	6.86	26.13

Protein Annotations

KEGG:00500+2.4.1.18	Gene3D:2.60.40.10	Gene3D:2.60.40.1180	MapMan:3.2.2.5	Gene3D:3.20.20.80	InterPro:A-amylase/branching_C
GO:A0A078CDV5	InterPro:Branching_enzy	EnsemblPlants:CDX75040	ProteinID:CDX75040	ProteinID:CDX75040.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0003844	GO:GO:0004553	GO:GO:0005488	GO:GO:0005975	GO:GO:0005978
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
GO:GO:0016787	GO:GO:0043169	EnsemblPlantsGene:GSBRNA2T00117069001	InterPro:Glyco_hydro_13_N	InterPro:Glyco_hydro_13_cat_dom	InterPro:Glyco_hydro_b
InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set	PFAM:PF00128
PFAM:PF02806	PFAM:PF02922	PIRSF:PIRSF000463	PANTHER:PTHR43651	PANTHER:PTHR43651:SF1	MetaCyc:PWY-5067
MetaCyc:PWY-622	SMART:SM00642	SUPFAM:SSF51011	SUPFAM:SSF51445	SUPFAM:SSF81296	UniPathway:UPA00164
UniParc:UPI0004EEA1E6	SEG:seg	:	:	:	:

Description

BnaA05g07860D

Coordinates

chrLK031802:-:2142696..2148287

Molecular Weight (calculated)

95976.2 Da

IEP (calculated)

4.940

GRAVY (calculated)

-0.491

Length

845 amino acids

Sequence
(BLAST)

001: MVYTISGVRF PHLPSIKKNS SLPSFNDDRR TNAVTFSLRK DTRSSSGKIF ARKPSYDSES SSIATTASEN LGSHQSDSSS AEPQETLSEV TQVHDDVDAQ
101: KAETEGLEQT SALSTSVGQS YRENIASMSE SLDQGVQLRR IPPPGDGKKI YDIDPMLKSY DGHLDYRYGQ YIKLREEIDK NEGGLEAFSR GYEIFGFTRS
201: ATGITYREWA PGAKAASLIG DFNNWNSKAD VMTRNEYGVW EIFLPNDADG SPAIPHGSRV KIRMDTTSGI KDSIPAWIKY SVQAPGEIPY DGVYYDPAEE
301: DKYVFKHPRP RKPTSLRIYE SHVGMSSTEP MINTYANFRD DVLPRIKKLG YNAVQIMAIQ EHSYYASFGY HVTNFFAPSS RFGTPDDLKS LIDKAHELGL
401: VVLMDIVHSH ASKNTLDGLN MFDGTDGQYF HSGERGYHWM WDSRLFNYGS WEVLRYLLSN ARWWLEEYKF DGFRFDGVTS MMYTHHGLQV EFTGNYNEYF
501: GYSTDVDAVV YLMLVNDMIH GLYPEAIVVG EDVSGMPAFC IPVEDGGVGF DYRLHMAVAD KWIELLKKRD EDWQVGDIVF TLTNRRWGEK CVVYAESHDQ
601: ALVGDKTIAF WLMDKDMYDF MAVDKQATPR VDRGIALHKM IRLITMGLGG EGYLNFMGNE FGHPEWIDFP RTDQHLPDGR VIPGNNGSYD KCRRRFDLGD
701: AEYLRYHGLQ EFDRAMQHLE EKYGFMTSEH QYISRKDEGD RVIVFEKGSL VFVFNFHWTN SYSDYRIGCS VPGKYKIVLD SDDSLFGGFS RLDDSAEFFT
801: SDGKYDDRPC SLMVYAPCRT AVVYAAVDGD EDSSLVPISL VPDDV

Best Arabidopsis Sequence Match ( AT2G36390.1 )
(BLAST)

001: MVYTISGVRF PHLPSIKKKN SSLHSFNEDL RRSNAVSFSL RKDSRSSGKV FARKPSYDSD SSSLATTASE KLRGHQSDSS SSASDQVQSR DTVSDDTQVL
101: GNVDVQKTEE AQETETLDQT SALSTSGSIS YKEDFAKMSH SVDQEVGQRK IPPPGDGKRI YDIDPMLNSH RNHLDYRYGQ YRKLREEIDK NEGGLEAFSR
201: GYEIFGFTRS ATGITYREWA PGAKAASLIG DFNNWNAKSD VMARNDFGVW EIFLPNNADG SPAIPHGSRV KIRMDTPSGI KDSIPAWIKY SVQPPGEIPY
301: NGVYYDPPEE DKYAFKHPRP KKPTSLRIYE SHVGMSSTEP KINTYANFRD DVLPRIKKLG YNAVQIMAIQ EHAYYASFGY HVTNFFAPSS RFGTPDDLKS
401: LIDKAHELGL VVLMDIVHSH ASKNTLDGLD MFDGTDGQYF HSGSRGYHWM WDSRLFNYGS WEVLRYLLSN ARWWLEEYKF DGFRFDGVTS MMYTHHGLQV
501: EFTGNYNEYF GYSTDVDAVV YLMLVNDLIH GLYPEAIVVG EDVSGMPAFC VPVEDGGVGF DYRLHMAVAD KWIELLKKRD EDWQVGDITF TLTNRRWGEK
601: CVVYAESHDQ ALVGDKTIAF WLMDKDMYDF MAVDRQATPR VDRGIALHKM IRLITMGLGG EGYLNFMGNE FGHPEWIDFP RTDQHLPDGR VIAGNNGSYD
701: KCRRRFDLGD AEYLRYHGLQ EFDRAMQNLE ETYGFMTSEH QYISRKDEGD RVIVFERGNL LFVFNFHWTN SYSDYRIGCS VPGKYKIVLD SDNSLFGGFN
801: RLDDSAEFFT SDGRHDDRPC SFMVYAPCRT AVVYAAVDDD DDDERSSLVP IGLLPEDV

Arabidopsis Description

SBE2.1SBE2.1 [Source:UniProtKB/TrEMBL;Acc:A0A178VXI8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.