Factsheet for HORVU2Hr1G072500.34

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P16770_001	Banana	cytosol, nucleus, plastid	9.59	89.39
GSMUA_Achr5P16760_001	Banana	cytosol	53.5	84.36
TraesCS2D01G290800.4	Wheat	plastid	98.54	73.45
TraesCS2A01G293400.1	Wheat	plastid	98.7	73.31
TraesCS2B01G309500.3	Wheat	plastid	98.7	73.31
OQU81503	Sorghum	plastid	92.36	68.68
AT5G03650.1	Thale cress	plastid	83.74	63.98
HORVU2Hr1G077120.1	Barley	plastid	86.18	63.93
CDX70296	Canola	plastid	84.72	62.25
CDY10367	Canola	plastid	84.23	61.89
GSMUA_Achr6P07530_001	Banana	mitochondrion	85.69	61.85
Bra009521.1-P	Field mustard	plastid	84.72	61.22
KRH67868	Soybean	mitochondrion	85.69	60.57
VIT_08s0007g03750.t01	Wine grape	plastid	83.09	59.49
CDX84127	Canola	plastid	81.3	59.45
CDX75040	Canola	plastid	81.3	59.17
KRG96156	Soybean	mitochondrion	83.58	59.08
Bra005269.1-P	Field mustard	plastid	80.98	58.93
Solyc09g009190.2.1	Tomato	plastid	82.93	58.22
AT2G36390.1	Thale cress	plastid	80.81	57.93
Zm00001d003817_P002	Maize	plastid	89.92	50.92
HORVU0Hr1G022790.5	Barley	cytosol, plastid	41.79	50.39
CDY43722	Canola	plastid	81.14	47.3
Os04t0409200-00	Rice	plastid	17.24	41.57
HORVU0Hr1G022780.8	Barley	cytosol, plastid	37.89	38.58
HORVU0Hr1G022810.3	Barley	mitochondrion	59.51	38.09
HORVU7Hr1G082850.6	Barley	cytosol, plastid	9.59	24.08
HORVU7Hr1G082830.1	Barley	plastid	27.15	23.1
GSMUA_Achr5P16780_001	Banana	cytosol, nucleus, plastid	1.46	4.05

Protein Annotations

KEGG:00500+2.4.1.18	Gene3D:2.60.40.10	Gene3D:2.60.40.1180	MapMan:3.2.2.5	Gene3D:3.20.20.80	InterPro:A-amylase/branching_C
UniProt:A0A287IF03	InterPro:Branching_enzy	GO:GO:0003674	GO:GO:0003824	GO:GO:0003844	GO:GO:0004553
GO:GO:0005488	GO:GO:0005975	GO:GO:0005978	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0016787	GO:GO:0043169	GO:GO:0102752
InterPro:Glyco_hydro_13_N	InterPro:Glyco_hydro_13_cat_dom	InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	EnsemblPlantsGene:HORVU2Hr1G072500	EnsemblPlants:HORVU2Hr1G072500.34
InterPro:IPR013780	InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set	PFAM:PF00128	PFAM:PF02806
PFAM:PF02922	PIRSF:PIRSF000463	PANTHER:PTHR43651	PANTHER:PTHR43651:SF1	SMART:SM00642	SUPFAM:SSF51011
SUPFAM:SSF51445	SUPFAM:SSF81296	UniParc:UPI000B47F1E6	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:520252636..520265966

Molecular Weight (calculated)

70810.2 Da

IEP (calculated)

5.692

GRAVY (calculated)

-0.464

Length

615 amino acids

Sequence
(BLAST)

001: AALVGDFNNW NPNADTMTRD DYGVWEIFLP NNADGSPAIP HGSRVKIRMD TPSGVKDSIS AWIKFSVQAP GEIPFNGIYY DPPEEEKYVF QHPQPKRPES
101: LRIYESHIGM SSPEPKINSY ANFRDEVLPR IKRLGYNAVQ IMAIQEHSYY ASFGYHVTNF FAPSSRFGTP EDLKSLIDRA HELGLLVLMD IVHSHSSNNT
201: LDGLNGFDGT DTHYFHGGPR GHHWMWDSRL FNYGSWEVLR FLLSNARWWL EEYKFDGFRF DGVTSMMYTH HGLQMTFTGN YGEYFGFATD VDAVVYLMLV
301: NDLIHGLYPD AVSIGEDVSG MPTFCIPVPD GGVGFDYRLH MAVADKWIEL LKQSDESWKM GDIVHTLTNR RWLEKCVTYA ESHDQALVGD KTIAFWLMDK
401: DMYDFMALDR PSTPRIDRGI ALHKMIRLVT MGLGGEGYLN FMGNEFGHPE WIDFPRGPQT LPTGKVLPGN NNSYDKCRRR FDLGDADFLR YRGMQEFDQA
501: MQHLEEKYGF MTSEHQYVSR KHEEDKVIIF ERGDLVFVFN FHWSNSFFDY RVGCSKPGKY KYQVALDSDD ALFGGFSRLD HDVDYFTTEH PHDNRPRSFS
601: VYTPSRTAVV YALTE

Best Arabidopsis Sequence Match ( AT5G03650.1 )
(BLAST)

001: MVVIHGVSLT PRFTLPSRPL NTGFNAGNST LSFFFKKHPL SRKIFAGKQS AEFDSSSQAI SASEKVLVPD NLDDDPRGFS QIFDLESQTM EYTEAVRTED
101: QTMNVVKERG VKPRIVPPPG DGKKIYEIDP MLRTYNNHLD YRYGQYKRLR EEIDKYEGGL EAFSRGYEKL GFSRSDAGIT YREWAPGAKA ASLIGDFNNW
201: NSNADIMTRN EFGVWEIFLP NNTDGSPAIP HGSRVKIRMD TPSGIKDSIP AWIKFSVQAP GEIPFNGIYY DPPEEEKYVF KHPQPKRPKS LRIYEAHVGM
301: SSTEPMVNTY ANFRDDVLPR IKKLGYNAVQ IMAIQEHSYY ASFGYHVTNF FAPSSRCGTP EELKSLIDRA HELGLVVLMD IVHSHASKNT LDGLNMFDGT
401: DAHYFHSGPR GYHWMWDSRL FNYGSWEVLR YLLSNARWWL EEYKFDGFRF DGVTSMMYTH HGLSVGFTGN YTEYFGLETD VDAVNYLMLV NDMIHGLYPE
501: AITVGEDVSG MPTFCIPVQD GGVGFDYRLH MAIADKWIEM LKKRDEDWQM GDIIYTLTNR RWSEKCISYA ESHDQALVGD KTIAFWLMDK DMYDFMAVDR
601: PSTPLIDRGI ALHKMIRLIT MGLGGEGYLN FMGNEFGHPE WIDFPRGEQR LSDGSVIPGN NFSYDKCRRR FDLGDADYLR YRGLQEFDQA MQHLEENYGF
701: MTSEHQFISR KDEADRVIVF ERGDLVFVFN FHWTSSYFDY RIGCSKPGKY KIVLDSDDPL FGGFNRLDRK AEYFTYDGLY DERPCSFMVY APCRTAVVYA
801: LANHD

Arabidopsis Description

SBE2.21,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LZS3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.