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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G535400.2 Wheat golgi 79.81 92.41
TraesCS7B01G472500.1 Wheat plastid 76.27 91.85
TraesCS7A01G549100.2 Wheat plastid 79.6 90.43
Zm00001d036363_P001 Maize plastid 25.18 86.74
HORVU0Hr1G022790.5 Barley cytosol, plastid 41.62 78.43
Os06t0726400-01 Rice plastid 66.91 78.41
OQU77158 Sorghum plastid 67.74 78.25
Zm00001d014844_P005 Maize plastid 66.49 77.64
HORVU0Hr1G022780.8 Barley cytosol, plastid 41.73 66.39
VIT_18s0001g00060.t01 Wine grape plastid 57.23 65.48
Solyc04g082400.2.1 Tomato plastid 56.92 64.81
GSMUA_Achr4P04690_001 Banana cytoskeleton, cytosol, vacuole 54.11 64.68
KRH51616 Soybean cytosol, mitochondrion, vacuole 42.87 62.61
KRH60937 Soybean plastid 56.4 60.36
PGSC0003DMT400025846 Potato cytosol 57.34 60.28
HORVU2Hr1G072500.34 Barley cytosol 38.09 59.51
HORVU2Hr1G077120.1 Barley plastid 42.35 49.1
HORVU7Hr1G082850.6 Barley cytosol, plastid 7.08 27.76
HORVU7Hr1G082830.1 Barley plastid 19.56 26.0
Protein Annotations
KEGG:00500+2.4.1.18Gene3D:2.60.40.10Gene3D:2.60.40.1180MapMan:3.2.2.5Gene3D:3.20.20.80InterPro:A-amylase/branching_C
UniProt:A0A287E826InterPro:Branching_enzyncoils:CoilGO:GO:0003674GO:GO:0003824GO:GO:0003844
GO:GO:0004553GO:GO:0005488GO:GO:0005975GO:GO:0005978GO:GO:0006091GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016740GO:GO:0016787GO:GO:0043169
InterPro:Glyco_hydro_13_NInterPro:Glyco_hydro_13_cat_domInterPro:Glyco_hydro_bInterPro:Glycoside_hydrolase_SFEnsemblPlantsGene:HORVU0Hr1G022810EnsemblPlants:HORVU0Hr1G022810.3
InterPro:IPR013780InterPro:IPR013783InterPro:Ig-like_foldInterPro:Ig_E-setPFAM:PF00128PFAM:PF02806
PFAM:PF02922PANTHER:PTHR43651PANTHER:PTHR43651:SF2SMART:SM00642SUPFAM:SSF51011SUPFAM:SSF51445
SUPFAM:SSF81296UniParc:UPI000B4711A3SEG:seg:::
Description
No Description!
Coordinates
chrchrUn:+:115133532..115140758
Molecular Weight (calculated)
105541.0 Da
IEP (calculated)
8.266
GRAVY (calculated)
-0.535
Length
961 amino acids
Sequence
(BLAST)
001: AHGFRLAQRR TLSRARPSTV HVHPGPPGPT DPLLPRPRFP LHCFFSSPVL LRERAATEKN HAFPLRLRRD TPPPPPSGRY IARRVTGPAE NGTHVRGRPQ
101: LLRRHXXXXX XXXXXXXXXX XXXXXXXXXX XAPSTTMPLL CLTSSSPSLR PAADRPGPGI SGGGNVRLSV VPAPSSLRLS WPRKAKSKLS LPVSAPRDFT
201: MATAQDGIDD LPIYDLDPKF AGFKDHFSYR MKKYRDQKHL IDEHEGGLEE FSKGYLKFGI NTENDATVYR EWAPAAKEAQ VIGDFNNWNG SGHRMTKDNF
301: GVWSIRISHV NGKPAIPHNS KVKFRFHRGD GVWVDRIPAW IRYAIADASK FGAPYDGVHW DPPTSERYVF KHPRPQKPDA PRIYEAHVGM SGEKPEVSTY
401: REFADNVLPR VKANNYNTVQ LMAIKEHSYY ASFGYHVTNF FAASSRSGTP EDLKYLVDKA HSLGLRVLMD VVHSHASSNM TDGLNGYDVG QNTQESYFHT
501: GERGYHKLWD SRLFNYANWE VLRFLLSNLR YWMDEFMFDG FRFDGVTSML YNHHGINMSF SGDYKEYFGL DTDVDAVVYM MLANHLMHKL LPEATVVAED
601: VSGMPVLCRS VDEGGVGFDY RLAMAIPDRW IDYLKNKDDL EWSMSGIAHT LTNRRYTEKC IAYAESHDQS IVGDKTMAFL LMDKEMYTGM SDLQPASPTI
701: DRGIALQKMI HFITMALGGD GYLNFMGNEF GHPEWIDFPR EGNNWSYDKC RRQWSLVDID HLRYKYMNAF DQAMNALDDK FSFLSSSKQI VSDMNEEKKV
801: IVFERGDLVF VFNFHPNKTY DGYKVGCDLP GKYKVALDSD ALMFGGHGRV AHDSDHFTSP EGIPGVPETN FNNRPNSFKI LSPPRTCVAY YRVEEKAEKP
901: KDGGAAFWGK TAPGYIDVEA TGVKDATDGE ATSGSEKVST GDGSVKRGIN FVFRSPDKDN K
Best Arabidopsis Sequence Match ( AT2G36390.1 )
(BLAST)
001: MVYTISGVRF PHLPSIKKKN SSLHSFNEDL RRSNAVSFSL RKDSRSSGKV FARKPSYDSD SSSLATTASE KLRGHQSDSS SSASDQVQSR DTVSDDTQVL
101: GNVDVQKTEE AQETETLDQT SALSTSGSIS YKEDFAKMSH SVDQEVGQRK IPPPGDGKRI YDIDPMLNSH RNHLDYRYGQ YRKLREEIDK NEGGLEAFSR
201: GYEIFGFTRS ATGITYREWA PGAKAASLIG DFNNWNAKSD VMARNDFGVW EIFLPNNADG SPAIPHGSRV KIRMDTPSGI KDSIPAWIKY SVQPPGEIPY
301: NGVYYDPPEE DKYAFKHPRP KKPTSLRIYE SHVGMSSTEP KINTYANFRD DVLPRIKKLG YNAVQIMAIQ EHAYYASFGY HVTNFFAPSS RFGTPDDLKS
401: LIDKAHELGL VVLMDIVHSH ASKNTLDGLD MFDGTDGQYF HSGSRGYHWM WDSRLFNYGS WEVLRYLLSN ARWWLEEYKF DGFRFDGVTS MMYTHHGLQV
501: EFTGNYNEYF GYSTDVDAVV YLMLVNDLIH GLYPEAIVVG EDVSGMPAFC VPVEDGGVGF DYRLHMAVAD KWIELLKKRD EDWQVGDITF TLTNRRWGEK
601: CVVYAESHDQ ALVGDKTIAF WLMDKDMYDF MAVDRQATPR VDRGIALHKM IRLITMGLGG EGYLNFMGNE FGHPEWIDFP RTDQHLPDGR VIAGNNGSYD
701: KCRRRFDLGD AEYLRYHGLQ EFDRAMQNLE ETYGFMTSEH QYISRKDEGD RVIVFERGNL LFVFNFHWTN SYSDYRIGCS VPGKYKIVLD SDNSLFGGFN
801: RLDDSAEFFT SDGRHDDRPC SFMVYAPCRT AVVYAAVDDD DDDERSSLVP IGLLPEDV
Arabidopsis Description
SBE2.1SBE2.1 [Source:UniProtKB/TrEMBL;Acc:A0A178VXI8]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.