Factsheet for GSMUA_Achr4P04690_001

Subcellular Localization

min:

: max

Winner_takes_all: cytoskeleton, vacuole, cytosol

Predictor Summary:

nucleus 1
plastid 2
vacuole 1
mitochondrion 1
cytoskeleton 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d036363_P001	Maize	plastid	24.25	69.89
VIT_18s0001g00060.t01	Wine grape	plastid	69.53	66.55
Zm00001d014844_P005	Maize	plastid	67.04	65.49
OQU77158	Sorghum	plastid	67.54	65.26
Os06t0726400-01	Rice	plastid	66.42	65.12
TraesCS7B01G472500.1	Wheat	plastid	64.43	64.91
Solyc04g082400.2.1	Tomato	plastid	67.29	64.1
HORVU0Hr1G022790.5	Barley	cytosol, plastid	39.8	62.75
TraesCS7D01G535400.2	Wheat	golgi	64.55	62.53
KRH51616	Soybean	cytosol, mitochondrion, vacuole	50.99	62.31
TraesCS7A01G549100.2	Wheat	plastid	64.8	61.58
KRH60937	Soybean	plastid	68.28	61.14
PGSC0003DMT400025846	Potato	cytosol	67.79	59.63
TraesCS7A01G549200.1	Wheat	plastid	44.78	56.69
TraesCS7B01G472400.1	Wheat	plastid	44.4	56.49
GSMUA_Achr5P16760_001	Banana	cytosol	26.87	55.38
TraesCS7D01G535500.1	Wheat	plastid	44.78	55.38
HORVU0Hr1G022810.3	Barley	mitochondrion	64.68	54.11
HORVU0Hr1G022780.8	Barley	cytosol, plastid	39.18	52.15
TraesCS7B01G472300.1	Wheat	plastid	40.3	50.47
TraesCS7A01G549300.2	Wheat	plastid	40.17	50.08
TraesCS7D01G535600.4	Wheat	plastid	40.42	47.79
GSMUA_Achr6P07530_001	Banana	mitochondrion	46.77	44.13
GSMUA_Achr5P16770_001	Banana	cytosol, nucleus, plastid	3.61	43.94
GSMUA_Achr6P13530_001	Banana	plastid	30.35	26.87
GSMUA_Achr5P16780_001	Banana	cytosol, nucleus, plastid	3.98	14.41

Protein Annotations

KEGG:00500+2.4.1.18	Gene3D:2.60.40.10	Gene3D:2.60.40.1180	MapMan:3.2.2.5	Gene3D:3.20.20.80	InterPro:A-amylase/branching_C
InterPro:Branching_enzy	GO:GO:0003674	GO:GO:0003824	GO:GO:0003844	GO:GO:0004553	GO:GO:0005488
GO:GO:0005975	GO:GO:0005978	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	GO:GO:0016787	GO:GO:0043169	EnsemblPlantsGene:GSMUA_Achr4G04690_001	EnsemblPlants:GSMUA_Achr4P04690_001
EnsemblPlants:GSMUA_Achr4T04690_001	InterPro:Glyco_hydro_13_N	InterPro:Glyco_hydro_13_cat_dom	InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780
InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set	UniProt:M0SL36	PFAM:PF00128	PFAM:PF02806
PFAM:PF02922	PIRSF:PIRSF000463	PANTHER:PTHR43651	PANTHER:PTHR43651:SF2	SMART:SM00642	SUPFAM:SSF51011
SUPFAM:SSF51445	SUPFAM:SSF81296	UniParc:UPI000294F51F	SEG:seg	:	:

Description

1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic [Source:GMGC_GENE;Acc:GSMUA_Achr4G04690_001]

Coordinates

chr4:-:3693732..3702744

Molecular Weight (calculated)

91585.2 Da

IEP (calculated)

4.934

GRAVY (calculated)

-0.460

Length

804 amino acids

Sequence
(BLAST)

001: MCHGYELLED WNLTSQEKDS RSHVLAKLQS ALVANSSIRF SVKYPFCCPH RLSINLKAER DFAISSVLGE NQAMTTTEED VQHCGIFDLD PSLEKFKDHL
101: IYRSKKYVEQ KSLIEKFEGS LEEFSQGYLK FGFNREQDAI VYREWAPAAQ EAQLIGDFNG WDGSNHKMEK NEFGVWNIKI PDAGGKPSIP HNSRVKFRFK
201: HGNGIWVDRI PAWIRYATVD PTRFAAPYDG VHWDPPPSER YIFKYSRPPK PAAPRIYEAH VGMSSSEPCV STYREFADTV LPRIRANNYN TVQLMAILEH
301: SYYGSFGYHV TNFFAVSSRS GTPEDLKYLI DKAHGLGLRV LMDVVHSHAS NNVTDGLNGW WLDEFNFDGF RFDGVTSMLY HHHGINMVFT GNYTEYFSEA
401: TDVDAVVYMM LANHLVHNLL PDATVIAEDV SGMPALCRPD YEGGVGFDYR LAMAIPDRWI DFLKNKMDSE WSMKEIVWSL TNRRYTEKCV AYAESHDQAI
501: VGDKTISFLL MDKVMYSGMS DLEPASPVIE RGIALHKMIH FLTMALGGEG YLNFMGNEFG HPEWIDFPRE GNSWSYDKCR RQWNLVDTDH LRYKHMNAFD
601: RAMNLLDDRF HFLASEKQIV SSISEEDKVI VFERGDLVFV FNFHPENTYS GYKVGCDLPG KYRVTLDSDA FEFGGHGRVG HDIDHFTSPE GIPGVSETNF
701: NNRPNSFKIL SPARTCVVYY KVDETLQQPD EDTTGTETTV TQVLQDSQVD KTAESPSEET ISTEETTVRQ VLQDSPDLAS DEVLVSSGIR DEKEIDTEDS
801: TASD

Best Arabidopsis Sequence Match ( AT5G03650.1 )
(BLAST)

001: MVVIHGVSLT PRFTLPSRPL NTGFNAGNST LSFFFKKHPL SRKIFAGKQS AEFDSSSQAI SASEKVLVPD NLDDDPRGFS QIFDLESQTM EYTEAVRTED
101: QTMNVVKERG VKPRIVPPPG DGKKIYEIDP MLRTYNNHLD YRYGQYKRLR EEIDKYEGGL EAFSRGYEKL GFSRSDAGIT YREWAPGAKA ASLIGDFNNW
201: NSNADIMTRN EFGVWEIFLP NNTDGSPAIP HGSRVKIRMD TPSGIKDSIP AWIKFSVQAP GEIPFNGIYY DPPEEEKYVF KHPQPKRPKS LRIYEAHVGM
301: SSTEPMVNTY ANFRDDVLPR IKKLGYNAVQ IMAIQEHSYY ASFGYHVTNF FAPSSRCGTP EELKSLIDRA HELGLVVLMD IVHSHASKNT LDGLNMFDGT
401: DAHYFHSGPR GYHWMWDSRL FNYGSWEVLR YLLSNARWWL EEYKFDGFRF DGVTSMMYTH HGLSVGFTGN YTEYFGLETD VDAVNYLMLV NDMIHGLYPE
501: AITVGEDVSG MPTFCIPVQD GGVGFDYRLH MAIADKWIEM LKKRDEDWQM GDIIYTLTNR RWSEKCISYA ESHDQALVGD KTIAFWLMDK DMYDFMAVDR
601: PSTPLIDRGI ALHKMIRLIT MGLGGEGYLN FMGNEFGHPE WIDFPRGEQR LSDGSVIPGN NFSYDKCRRR FDLGDADYLR YRGLQEFDQA MQHLEENYGF
701: MTSEHQFISR KDEADRVIVF ERGDLVFVFN FHWTSSYFDY RIGCSKPGKY KIVLDSDDPL FGGFNRLDRK AEYFTYDGLY DERPCSFMVY APCRTAVVYA
801: LANHD

Arabidopsis Description

SBE2.21,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LZS3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.