Factsheet for TraesCS7D01G535600.4

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G549300.2	Wheat	plastid	88.53	93.33
TraesCS7B01G472300.1	Wheat	plastid	87.65	92.83
HORVU0Hr1G022780.8	Barley	cytosol, plastid	78.82	88.74
Zm00001d036363_P001	Maize	plastid	27.35	66.67
TraesCS7D01G535500.1	Wheat	plastid	58.97	61.69
TraesCS7D01G535400.2	Wheat	golgi	63.38	51.93
Os06t0726400-01	Rice	plastid	61.91	51.34
Zm00001d014844_P005	Maize	plastid	60.74	50.18
OQU77158	Sorghum	plastid	60.15	49.16
KRH51616	Soybean	cytosol, mitochondrion, vacuole	42.94	44.38
VIT_18s0001g00060.t01	Wine grape	plastid	52.5	42.5
Solyc04g082400.2.1	Tomato	plastid	50.29	40.52
GSMUA_Achr4P04690_001	Banana	cytoskeleton, cytosol, vacuole	47.79	40.42
KRH60937	Soybean	plastid	51.03	38.64
PGSC0003DMT400025846	Potato	cytosol	50.15	37.31
TraesCS2D01G290800.4	Wheat	plastid	39.85	32.85
TraesCS2D01G308600.1	Wheat	plastid	40.0	32.54
TraesCS7D01G344000.1	Wheat	plastid	28.97	21.55

Protein Annotations

KEGG:00500+2.4.1.18	Gene3D:2.60.40.10	MapMan:3.2.2.5	Gene3D:3.20.20.80	InterPro:Branching_enzy	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0003844	GO:GO:0004553	GO:GO:0005975	GO:GO:0005978
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
GO:GO:0016787	InterPro:Glyco_hydro_13_N	InterPro:Glyco_hydro_13_cat_dom	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013783	InterPro:Ig-like_fold
InterPro:Ig_E-set	PFAM:PF00128	PFAM:PF02922	PANTHER:PTHR43651	PANTHER:PTHR43651:SF2	SMART:SM00642
SUPFAM:SSF51445	SUPFAM:SSF81296	EnsemblPlantsGene:TraesCS7D01G535600	EnsemblPlants:TraesCS7D01G535600.4	TIGR:cd02854	SEG:seg

Description

No Description!

Coordinates

chr7D:-:627353202..627358921

Molecular Weight (calculated)

76955.2 Da

IEP (calculated)

7.110

GRAVY (calculated)

-0.432

Length

680 amino acids

Sequence
(BLAST)

001: MLCLASSSSL PSLRPRTSPT ADRPGPGNSV SRDLFCFILL TFSFMLAHGE VLDGPDATML TGRLQGGGGA GGSVRLSVVS VPSSLRWSWP LKANSKISVP
101: ETARENKTVA TEDGVSHLPI YDLDPKLAEF KNHFNYRMRR YHYQKHLIEK HEGSLEEFSR GYLKFGINAE PGATVYREWA PAAMEAQLVG DFNNWNGSEH
201: MMTKDNFGVW SIKISHVDGK PAIPHNSKVK FRFRHDGVWV ERIPAWIRYT IVNTSKFGAP YDGVHWDPPT SERYVFKHPR PRRPDIPRIY EAHVGMSGEK
301: PEVYREFADN VLPRIRAKNY NTVQLMAIME HSYYASFGYH VTNFFAVSSK SGTPEDLKYL VDKAHSLGLR VLMDVVHSHA SKNVTDGLNG YDVGQSAQES
401: YFYAGDRGYH KLWDSRLFNY TNWEVLRFLL SNLRYWMDEF MFDGFRFDGV TSMLYNHHGI NTSFTGNYKE YFGLDTNVDA IIYMMLANHL IHKLLPEATI
501: IAEDVSVMPV LCRPVDEGGV GFDYRQAMAI PERWVDYLKN KDAQELSMSG ISQTLNNRDK DQDAIETTIA QHTTPRSTFD AVSEIPSHIS PTSTFEHNSQ
601: LETSPSKLPI IQALEALLLA ERQGAAALRD ATDIMRRQIE QSDALLTKTK QEMDEVRKKQ AKTDQILRLL ISGAQGNPTS

Best Arabidopsis Sequence Match ( AT2G36390.1 )
(BLAST)

001: MVYTISGVRF PHLPSIKKKN SSLHSFNEDL RRSNAVSFSL RKDSRSSGKV FARKPSYDSD SSSLATTASE KLRGHQSDSS SSASDQVQSR DTVSDDTQVL
101: GNVDVQKTEE AQETETLDQT SALSTSGSIS YKEDFAKMSH SVDQEVGQRK IPPPGDGKRI YDIDPMLNSH RNHLDYRYGQ YRKLREEIDK NEGGLEAFSR
201: GYEIFGFTRS ATGITYREWA PGAKAASLIG DFNNWNAKSD VMARNDFGVW EIFLPNNADG SPAIPHGSRV KIRMDTPSGI KDSIPAWIKY SVQPPGEIPY
301: NGVYYDPPEE DKYAFKHPRP KKPTSLRIYE SHVGMSSTEP KINTYANFRD DVLPRIKKLG YNAVQIMAIQ EHAYYASFGY HVTNFFAPSS RFGTPDDLKS
401: LIDKAHELGL VVLMDIVHSH ASKNTLDGLD MFDGTDGQYF HSGSRGYHWM WDSRLFNYGS WEVLRYLLSN ARWWLEEYKF DGFRFDGVTS MMYTHHGLQV
501: EFTGNYNEYF GYSTDVDAVV YLMLVNDLIH GLYPEAIVVG EDVSGMPAFC VPVEDGGVGF DYRLHMAVAD KWIELLKKRD EDWQVGDITF TLTNRRWGEK
601: CVVYAESHDQ ALVGDKTIAF WLMDKDMYDF MAVDRQATPR VDRGIALHKM IRLITMGLGG EGYLNFMGNE FGHPEWIDFP RTDQHLPDGR VIAGNNGSYD
701: KCRRRFDLGD AEYLRYHGLQ EFDRAMQNLE ETYGFMTSEH QYISRKDEGD RVIVFERGNL LFVFNFHWTN SYSDYRIGCS VPGKYKIVLD SDNSLFGGFN
801: RLDDSAEFFT SDGRHDDRPC SFMVYAPCRT AVVYAAVDDD DDDERSSLVP IGLLPEDV

Arabidopsis Description

SBE2.1SBE2.1 [Source:UniProtKB/TrEMBL;Acc:A0A178VXI8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.