CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
plastid 6
vacuole 1
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH51616	Soybean	cytosol, mitochondrion, vacuole	60.58	82.67
Zm00001d036363_P001	Maize	plastid	23.72	76.34
VIT_18s0001g00060.t01	Wine grape	plastid	69.27	74.05
Solyc04g082400.2.1	Tomato	plastid	69.15	73.58
PGSC0003DMT400025846	Potato	cytosol	69.71	68.49
GSMUA_Achr4P04690_001	Banana	cytoskeleton, cytosol, vacuole	61.14	68.28
Zm00001d014844_P005	Maize	plastid	62.47	68.17
HORVU0Hr1G022790.5	Barley	cytosol, plastid	38.31	67.45
Os06t0726400-01	Rice	plastid	61.58	67.44
TraesCS7B01G472500.1	Wheat	plastid	59.58	67.04
OQU77158	Sorghum	plastid	61.8	66.71
TraesCS7D01G535400.2	Wheat	golgi	59.91	64.82
TraesCS7A01G549100.2	Wheat	plastid	60.02	63.71
TraesCS7B01G472400.1	Wheat	plastid	41.43	58.86
TraesCS7A01G549200.1	Wheat	plastid	41.54	58.74
TraesCS7D01G535500.1	Wheat	plastid	42.09	58.15
HORVU0Hr1G022780.8	Barley	cytosol, plastid	38.2	56.79
HORVU0Hr1G022810.3	Barley	mitochondrion	60.36	56.4
TraesCS7B01G472300.1	Wheat	plastid	38.64	54.05
TraesCS7A01G549300.2	Wheat	plastid	38.42	53.49
TraesCS7D01G535600.4	Wheat	plastid	38.64	51.03
KRH67868	Soybean	mitochondrion	45.21	46.67
KRG96156	Soybean	mitochondrion	44.77	46.21
KRH56220	Soybean	cytosol	2.56	30.26
KRG98710	Soybean	plastid	28.29	28.25

Protein Annotations

KEGG:00500+2.4.1.18	EntrezGene:100792499	Gene3D:2.60.40.10	Gene3D:2.60.40.1180	MapMan:3.2.2.5	Gene3D:3.20.20.80
InterPro:A-amylase/branching_C	EMBL:ACUP02002143	InterPro:Branching_enzy	EnsemblPlantsGene:GLYMA_04G017700	GO:GO:0003674	GO:GO:0003824
GO:GO:0003844	GO:GO:0004553	GO:GO:0005488	GO:GO:0005975	GO:GO:0005978	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0016787
GO:GO:0043169	InterPro:Glyco_hydro_13_N	InterPro:Glyco_hydro_13_cat_dom	InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780
InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set	UniProt:K7KHN1	EnsemblPlants:KRH60937	ProteinID:KRH60937
ProteinID:KRH60937.1	PFAM:PF00128	PFAM:PF02806	PFAM:PF02922	PIRSF:PIRSF000463	PANTHER:PTHR43651
PANTHER:PTHR43651:SF2	MetaCyc:PWY-5067	MetaCyc:PWY-622	SMART:SM00642	SUPFAM:SSF51011	SUPFAM:SSF51445
SUPFAM:SSF81296	UniParc:UPI000233A805	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:1383768..1392399

Molecular Weight (calculated)

101598.0 Da

IEP (calculated)

4.758

GRAVY (calculated)

-0.429

Length

898 amino acids

Sequence
(BLAST)

001: MINCLGLYPL ISAPSTIACT THIVRSKQYL ATQKPVNLAL GYRNPHGYGF SFGSRRSIHE RVSSHFKGIA VMTDDKSTMS STEEDLENIG IFHIDPSLKP
101: YKDHFKYRLK RYVDQKKLIE EYEGGLEEFS QGYLKFGFNR EEGGIVYCEW APAAQEAQII GDFNGWDGSN HQMEKNQFGV WSIRIPDTDG NSAIPHNSRV
201: KFRFRHGDGV WVDRIPAWIK YATVDPTRFA APYDGVYWDP PLSERYQFKY PRPPKPKAPR IYEAHVGMSS FEPRINSYRE FADEILPRIR ANNYNTVQLM
301: AVMEHSYYAS FGYHVTNFFA VSSRSGTPED LKYLIDKAHS LGLQVLMDVI HSHASNNVTD GLNGFDVGQT SQDSYFHTGD RGYHKLWDSR LFNYANWEVL
401: RFLLSNLRWW LEEFKFDGFR FDGVTSMLYH HHGINIAFTG DYNEYFSEAT DVDAVVYLML ANCLIHSILP DATVIAEDVS GMPGLGQPVS DGGIGFDYRL
501: AMAIPDKWID YLKNKNDYAW SMKEISWSLT NRRYTEKCVS YAESHDQAIV GDKTVAFLLM DEEMYSGMSS LVDASPIVER GIALQKMIHF ITMALGGEGY
601: LNFMGNEFGH PEWIDFPREG NGWSYEKCRR QWNLVDTDHL RYKFMNAFDR AMNLLDDKFS FLASTKQIVS SADDDDKVIV FERGDLIFVF NFHPENTYEG
701: YKVGCDLPGK YRVALDSDAW EFGGRGRVGH DVDHFTSPEG IPGVPETNFN NRPNSFKVLS PARTCVAYYR VEESQEDDDN NSLVGVEETS AAADVAKIPD
801: ESASTESEDI KLDGVKETLA AADVAKIPDE SAPLESEDSN LDVVKEPLAA ANAEVTKISG ELVSVETEGI NLDKLEETIV AASVESEVVR DKPEDAAN

Best Arabidopsis Sequence Match ( AT2G36390.1 )
(BLAST)

001: MVYTISGVRF PHLPSIKKKN SSLHSFNEDL RRSNAVSFSL RKDSRSSGKV FARKPSYDSD SSSLATTASE KLRGHQSDSS SSASDQVQSR DTVSDDTQVL
101: GNVDVQKTEE AQETETLDQT SALSTSGSIS YKEDFAKMSH SVDQEVGQRK IPPPGDGKRI YDIDPMLNSH RNHLDYRYGQ YRKLREEIDK NEGGLEAFSR
201: GYEIFGFTRS ATGITYREWA PGAKAASLIG DFNNWNAKSD VMARNDFGVW EIFLPNNADG SPAIPHGSRV KIRMDTPSGI KDSIPAWIKY SVQPPGEIPY
301: NGVYYDPPEE DKYAFKHPRP KKPTSLRIYE SHVGMSSTEP KINTYANFRD DVLPRIKKLG YNAVQIMAIQ EHAYYASFGY HVTNFFAPSS RFGTPDDLKS
401: LIDKAHELGL VVLMDIVHSH ASKNTLDGLD MFDGTDGQYF HSGSRGYHWM WDSRLFNYGS WEVLRYLLSN ARWWLEEYKF DGFRFDGVTS MMYTHHGLQV
501: EFTGNYNEYF GYSTDVDAVV YLMLVNDLIH GLYPEAIVVG EDVSGMPAFC VPVEDGGVGF DYRLHMAVAD KWIELLKKRD EDWQVGDITF TLTNRRWGEK
601: CVVYAESHDQ ALVGDKTIAF WLMDKDMYDF MAVDRQATPR VDRGIALHKM IRLITMGLGG EGYLNFMGNE FGHPEWIDFP RTDQHLPDGR VIAGNNGSYD
701: KCRRRFDLGD AEYLRYHGLQ EFDRAMQNLE ETYGFMTSEH QYISRKDEGD RVIVFERGNL LFVFNFHWTN SYSDYRIGCS VPGKYKIVLD SDNSLFGGFN
801: RLDDSAEFFT SDGRHDDRPC SFMVYAPCRT AVVYAAVDDD DDDERSSLVP IGLLPEDV

Arabidopsis Description

SBE2.1SBE2.1 [Source:UniProtKB/TrEMBL;Acc:A0A178VXI8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.