Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- vacuole 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G549200.1 | Wheat | plastid | 90.19 | 89.76 |
| TraesCS7D01G535500.1 | Wheat | plastid | 90.51 | 88.0 |
| HORVU0Hr1G022790.5 | Barley | cytosol, plastid | 70.57 | 87.45 |
| Zm00001d036363_P001 | Maize | plastid | 32.91 | 74.55 |
| TraesCS7B01G472300.1 | Wheat | plastid | 62.5 | 61.53 |
| TraesCS7B01G472500.1 | Wheat | plastid | 72.15 | 57.14 |
| Os06t0726400-01 | Rice | plastid | 72.63 | 55.98 |
| Zm00001d014844_P005 | Maize | plastid | 70.57 | 54.19 |
| OQU77158 | Sorghum | plastid | 69.94 | 53.12 |
| KRH51616 | Soybean | cytosol, mitochondrion, vacuole | 49.05 | 47.11 |
| VIT_18s0001g00060.t01 | Wine grape | plastid | 60.44 | 45.48 |
| GSMUA_Achr4P04690_001 | Banana | cytoskeleton, cytosol, vacuole | 56.49 | 44.4 |
| Solyc04g082400.2.1 | Tomato | plastid | 58.54 | 43.84 |
| KRH60937 | Soybean | plastid | 58.86 | 41.43 |
| PGSC0003DMT400025846 | Potato | cytosol | 58.7 | 40.59 |
| TraesCS2B01G309500.3 | Wheat | plastid | 45.89 | 35.02 |
| TraesCS2B01G327300.4 | Wheat | golgi | 45.09 | 34.09 |
| TraesCS7B01G248000.1 | Wheat | plastid | 32.59 | 22.54 |
Protein Annotations
| KEGG:00500+2.4.1.18 | Gene3D:2.60.40.10 | MapMan:3.2.2.5 | Gene3D:3.20.20.80 | InterPro:Branching_enzy | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003844 | GO:GO:0004553 | GO:GO:0005975 | GO:GO:0005978 | GO:GO:0006091 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0016787 |
| InterPro:Glyco_hydro_13_N | InterPro:Glyco_hydro_13_cat_dom | InterPro:Glycoside_hydrolase_SF | InterPro:IPR013783 | InterPro:Ig-like_fold | InterPro:Ig_E-set |
| PFAM:PF00128 | PFAM:PF02922 | PIRSF:PIRSF000463 | PANTHER:PTHR43651 | PANTHER:PTHR43651:SF2 | SMART:SM00642 |
| SUPFAM:SSF51445 | SUPFAM:SSF81296 | EnsemblPlantsGene:TraesCS7B01G472400 | EnsemblPlants:TraesCS7B01G472400.1 | TIGR:cd02854 | SEG:seg |
Description
No Description!
Coordinates
chr7B:+:728665334..728684619
Molecular Weight (calculated)
71380.5 Da
IEP (calculated)
6.752
GRAVY (calculated)
-0.369
Length
632 amino acids
Sequence
(BLAST)
(BLAST)
001: MLCLSSSLLP RPSAAADRPP PGIIAGGGGG GGKRLSVVPS VPFLLRWLWP RKAKSKSFVS VTARGNKIAA TTGYGSDHLP IYDLDLKLAE FKDHFDYTMN
101: RYLEQKHLIE KHEGSLEEFS KGYLKFGINT EHGASVYREW APAAEEAQLV GDFNNWNGSG HKMAKDNFGV WSIRISHVNG KPAIPHNSKV KFRFRHHGVW
201: VERIPAWIRY ATVTASESGA PYDGLHWDPP SSERYVFNHP RPPKPDVPRI YEAHVGVSGG KLEAGTYREF ADNVLPCLRA TNYNTVQLMG IMEHSDSASF
301: GYHVTNFFAV SSRSGTPEDL KYLIDKAHSL GLRVLMDVVH SHASNNVIDG LNGYDVGQSA HESYFYTGDK GYNKMWNGRM FNYANWEVLR FLLSNLRYWM
401: DEFMFDGFRF VGVTSMLYNH NGINMSFNGN YKDYIGLDTN VDAFVYMMLA NHLMHKLFPE AIVVAVDVSG MPVLCWPVDE GGLGFDYRQA MTIPDRWIDY
501: LENKGDQQWS MSSVISQTLT NRRYPEKFIA YAERQNHSII GSKTMAFLLM EWETYSGMSA MDPDSPTIDR AIALQKMIHF ITMAFGGDSY LKFMGNEYMN
601: AFDQAVDTPS DKCSFLSSSN QTASHMNEEE KD
101: RYLEQKHLIE KHEGSLEEFS KGYLKFGINT EHGASVYREW APAAEEAQLV GDFNNWNGSG HKMAKDNFGV WSIRISHVNG KPAIPHNSKV KFRFRHHGVW
201: VERIPAWIRY ATVTASESGA PYDGLHWDPP SSERYVFNHP RPPKPDVPRI YEAHVGVSGG KLEAGTYREF ADNVLPCLRA TNYNTVQLMG IMEHSDSASF
301: GYHVTNFFAV SSRSGTPEDL KYLIDKAHSL GLRVLMDVVH SHASNNVIDG LNGYDVGQSA HESYFYTGDK GYNKMWNGRM FNYANWEVLR FLLSNLRYWM
401: DEFMFDGFRF VGVTSMLYNH NGINMSFNGN YKDYIGLDTN VDAFVYMMLA NHLMHKLFPE AIVVAVDVSG MPVLCWPVDE GGLGFDYRQA MTIPDRWIDY
501: LENKGDQQWS MSSVISQTLT NRRYPEKFIA YAERQNHSII GSKTMAFLLM EWETYSGMSA MDPDSPTIDR AIALQKMIHF ITMAFGGDSY LKFMGNEYMN
601: AFDQAVDTPS DKCSFLSSSN QTASHMNEEE KD
001: MVYTISGVRF PHLPSIKKKN SSLHSFNEDL RRSNAVSFSL RKDSRSSGKV FARKPSYDSD SSSLATTASE KLRGHQSDSS SSASDQVQSR DTVSDDTQVL
101: GNVDVQKTEE AQETETLDQT SALSTSGSIS YKEDFAKMSH SVDQEVGQRK IPPPGDGKRI YDIDPMLNSH RNHLDYRYGQ YRKLREEIDK NEGGLEAFSR
201: GYEIFGFTRS ATGITYREWA PGAKAASLIG DFNNWNAKSD VMARNDFGVW EIFLPNNADG SPAIPHGSRV KIRMDTPSGI KDSIPAWIKY SVQPPGEIPY
301: NGVYYDPPEE DKYAFKHPRP KKPTSLRIYE SHVGMSSTEP KINTYANFRD DVLPRIKKLG YNAVQIMAIQ EHAYYASFGY HVTNFFAPSS RFGTPDDLKS
401: LIDKAHELGL VVLMDIVHSH ASKNTLDGLD MFDGTDGQYF HSGSRGYHWM WDSRLFNYGS WEVLRYLLSN ARWWLEEYKF DGFRFDGVTS MMYTHHGLQV
501: EFTGNYNEYF GYSTDVDAVV YLMLVNDLIH GLYPEAIVVG EDVSGMPAFC VPVEDGGVGF DYRLHMAVAD KWIELLKKRD EDWQVGDITF TLTNRRWGEK
601: CVVYAESHDQ ALVGDKTIAF WLMDKDMYDF MAVDRQATPR VDRGIALHKM IRLITMGLGG EGYLNFMGNE FGHPEWIDFP RTDQHLPDGR VIAGNNGSYD
701: KCRRRFDLGD AEYLRYHGLQ EFDRAMQNLE ETYGFMTSEH QYISRKDEGD RVIVFERGNL LFVFNFHWTN SYSDYRIGCS VPGKYKIVLD SDNSLFGGFN
801: RLDDSAEFFT SDGRHDDRPC SFMVYAPCRT AVVYAAVDDD DDDERSSLVP IGLLPEDV
101: GNVDVQKTEE AQETETLDQT SALSTSGSIS YKEDFAKMSH SVDQEVGQRK IPPPGDGKRI YDIDPMLNSH RNHLDYRYGQ YRKLREEIDK NEGGLEAFSR
201: GYEIFGFTRS ATGITYREWA PGAKAASLIG DFNNWNAKSD VMARNDFGVW EIFLPNNADG SPAIPHGSRV KIRMDTPSGI KDSIPAWIKY SVQPPGEIPY
301: NGVYYDPPEE DKYAFKHPRP KKPTSLRIYE SHVGMSSTEP KINTYANFRD DVLPRIKKLG YNAVQIMAIQ EHAYYASFGY HVTNFFAPSS RFGTPDDLKS
401: LIDKAHELGL VVLMDIVHSH ASKNTLDGLD MFDGTDGQYF HSGSRGYHWM WDSRLFNYGS WEVLRYLLSN ARWWLEEYKF DGFRFDGVTS MMYTHHGLQV
501: EFTGNYNEYF GYSTDVDAVV YLMLVNDLIH GLYPEAIVVG EDVSGMPAFC VPVEDGGVGF DYRLHMAVAD KWIELLKKRD EDWQVGDITF TLTNRRWGEK
601: CVVYAESHDQ ALVGDKTIAF WLMDKDMYDF MAVDRQATPR VDRGIALHKM IRLITMGLGG EGYLNFMGNE FGHPEWIDFP RTDQHLPDGR VIAGNNGSYD
701: KCRRRFDLGD AEYLRYHGLQ EFDRAMQNLE ETYGFMTSEH QYISRKDEGD RVIVFERGNL LFVFNFHWTN SYSDYRIGCS VPGKYKIVLD SDNSLFGGFN
801: RLDDSAEFFT SDGRHDDRPC SFMVYAPCRT AVVYAAVDDD DDDERSSLVP IGLLPEDV
Arabidopsis Description
SBE2.1SBE2.1 [Source:UniProtKB/TrEMBL;Acc:A0A178VXI8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.