Factsheet for TraesCS7B01G472500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G535400.2	Wheat	golgi	97.49	93.73
TraesCS7A01G549100.2	Wheat	plastid	96.12	90.66
Zm00001d036363_P001	Maize	plastid	30.33	86.74
Os06t0726400-01	Rice	plastid	80.58	78.41
Zm00001d014844_P005	Maize	plastid	79.82	77.4
OQU77158	Sorghum	plastid	80.2	76.92
HORVU0Hr1G022810.3	Barley	mitochondrion	91.85	76.27
TraesCS7B01G472400.1	Wheat	plastid	57.14	72.15
TraesCS7B01G472300.1	Wheat	plastid	52.51	65.26
VIT_18s0001g00060.t01	Wine grape	plastid	68.42	65.0
Solyc04g082400.2.1	Tomato	plastid	68.17	64.45
GSMUA_Achr4P04690_001	Banana	cytoskeleton, cytosol, vacuole	64.91	64.43
KRH51616	Soybean	cytosol, mitochondrion, vacuole	51.63	62.61
KRH60937	Soybean	plastid	67.04	59.58
PGSC0003DMT400025846	Potato	cytosol	67.92	59.3
TraesCS2B01G309500.3	Wheat	plastid	50.63	48.79
TraesCS2B01G327300.4	Wheat	golgi	50.25	47.97
TraesCS7B01G248000.1	Wheat	plastid	32.33	28.23

Protein Annotations

KEGG:00500+2.4.1.18	Gene3D:2.60.40.10	Gene3D:2.60.40.1180	MapMan:3.2.2.5	Gene3D:3.20.20.80	InterPro:A-amylase/branching_C
InterPro:Branching_enzy	GO:GO:0003674	GO:GO:0003824	GO:GO:0003844	GO:GO:0004553	GO:GO:0005488
GO:GO:0005975	GO:GO:0005978	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	GO:GO:0016787	GO:GO:0043169	InterPro:Glyco_hydro_13_N	InterPro:Glyco_hydro_13_cat_dom
InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set
PFAM:PF00128	PFAM:PF02806	PFAM:PF02922	PIRSF:PIRSF000463	PANTHER:PTHR43651	PANTHER:PTHR43651:SF2
SMART:SM00642	SUPFAM:SSF51011	SUPFAM:SSF51445	SUPFAM:SSF81296	EnsemblPlantsGene:TraesCS7B01G472500	EnsemblPlants:TraesCS7B01G472500.1
TIGR:cd02854	TIGR:cd11321	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7B:+:728689640..728694839

Molecular Weight (calculated)

90208.3 Da

IEP (calculated)

6.569

GRAVY (calculated)

-0.479

Length

798 amino acids

Sequence
(BLAST)

001: MLCLTSSSPS LLPRPSRPAA DRPGPGISGG ANVRLSAVPA PSPLRWKAKS DFSAPVSAPR DYTMATAEDG VGDLPIYDLD PKFAGFKEHF SYRMKKYLEQ
101: KHSIEKYEGG LEEFSKGYLK FGINTENDAT VYREWAPAAM DAQLIGDFNN WNGSGHRMTK DNFGVWSVRI SHVNGKPAIP HNSKVKFRFH RGDGLWVDRV
201: PAWIRYATFD ASKFGAPYDG VHWDPPIGER YVFKHPRPRK PDAPRIYEAH VGMSGEKPEV STYREFADNV LPRIKANNYN TVQLMAIMEH SYYASFGYHV
301: TNFFAVSSRS GTPEDLKYLV DKAHSLGLRV LMDVVHSHAS SNKTDGLNGY DVGQNTQESY FHTGERGYHK LWDSRLFNYA NWEVLRFLLS NLRYWMDEFM
401: FDGFRFDGVT SMLYNHHGIN MSFTGSYKEY FGLDTDVDAV VYLMLANHLM HKLLPEATVV AEDVSGMPVL CRSVDEGGVG FDYRLAMAIP DRWIDYLKNK
501: DDLEWSMSGI AHTLTNRRYT EKCIAYAESH DQSIVGDKTM AFLLMDKEMY TGMSDLQPAS ITVDRGIALQ KMIHFITMAL GGDGYLNFMG NEFGHPEWID
601: FPREGNNWSY DKCRRQWSLA DIDHLRYKYM NAFDQAMNAL DDKFSFLSSS KQIVSDMNEE KKIIVFERGD LVFVFNFHPS KTYDGYKVGC DLPGKYKVAL
701: DSDALMFGGH GRVAHDNDHF TSPEGVPGVP ETNFNNRPNS FKILSPSRTC VAYYRVEEKA EKPKGEGAAS WGKTALGYID VEATHVKDAA DGEATSGS

Best Arabidopsis Sequence Match ( AT2G36390.1 )
(BLAST)

001: MVYTISGVRF PHLPSIKKKN SSLHSFNEDL RRSNAVSFSL RKDSRSSGKV FARKPSYDSD SSSLATTASE KLRGHQSDSS SSASDQVQSR DTVSDDTQVL
101: GNVDVQKTEE AQETETLDQT SALSTSGSIS YKEDFAKMSH SVDQEVGQRK IPPPGDGKRI YDIDPMLNSH RNHLDYRYGQ YRKLREEIDK NEGGLEAFSR
201: GYEIFGFTRS ATGITYREWA PGAKAASLIG DFNNWNAKSD VMARNDFGVW EIFLPNNADG SPAIPHGSRV KIRMDTPSGI KDSIPAWIKY SVQPPGEIPY
301: NGVYYDPPEE DKYAFKHPRP KKPTSLRIYE SHVGMSSTEP KINTYANFRD DVLPRIKKLG YNAVQIMAIQ EHAYYASFGY HVTNFFAPSS RFGTPDDLKS
401: LIDKAHELGL VVLMDIVHSH ASKNTLDGLD MFDGTDGQYF HSGSRGYHWM WDSRLFNYGS WEVLRYLLSN ARWWLEEYKF DGFRFDGVTS MMYTHHGLQV
501: EFTGNYNEYF GYSTDVDAVV YLMLVNDLIH GLYPEAIVVG EDVSGMPAFC VPVEDGGVGF DYRLHMAVAD KWIELLKKRD EDWQVGDITF TLTNRRWGEK
601: CVVYAESHDQ ALVGDKTIAF WLMDKDMYDF MAVDRQATPR VDRGIALHKM IRLITMGLGG EGYLNFMGNE FGHPEWIDFP RTDQHLPDGR VIAGNNGSYD
701: KCRRRFDLGD AEYLRYHGLQ EFDRAMQNLE ETYGFMTSEH QYISRKDEGD RVIVFERGNL LFVFNFHWTN SYSDYRIGCS VPGKYKIVLD SDNSLFGGFN
801: RLDDSAEFFT SDGRHDDRPC SFMVYAPCRT AVVYAAVDDD DDDERSSLVP IGLLPEDV

Arabidopsis Description

SBE2.1SBE2.1 [Source:UniProtKB/TrEMBL;Acc:A0A178VXI8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.