Factsheet for GSMUA_Achr5P16760_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G072500.34	Barley	cytosol	84.36	53.5
GSMUA_Achr6P07530_001	Banana	mitochondrion	90.26	41.31
AT5G03650.1	Thale cress	plastid	82.56	40.0
TraesCS2D01G290800.4	Wheat	plastid	83.85	39.64
TraesCS2B01G309500.3	Wheat	plastid	84.1	39.61
EES06902	Sorghum	plastid	81.54	39.6
OQU81503	Sorghum	plastid	83.85	39.54
Os02t0528200-01	Rice	plastid	83.33	39.39
TraesCS2A01G293400.1	Wheat	plastid	83.59	39.37
Zm00001d016684_P005	Maize	plastid	80.0	38.85
CDX70296	Canola	plastid	82.31	38.35
CDY10367	Canola	plastid	81.79	38.11
Bra009521.1-P	Field mustard	plastid	82.56	37.84
VIT_08s0007g03750.t01	Wine grape	plastid	83.33	37.83
KRH67868	Soybean	mitochondrion	84.1	37.7
HORVU2Hr1G077120.1	Barley	plastid	79.49	37.39
TraesCS2A01G310300.2	Wheat	plastid	79.74	37.29
TraesCS2B01G327300.4	Wheat	golgi	79.74	37.2
CDX84127	Canola	plastid	80.0	37.1
Bra005269.1-P	Field mustard	plastid	80.26	37.04
TraesCS2D01G308600.1	Wheat	plastid	79.23	36.96
CDX75040	Canola	plastid	80.0	36.92
Solyc09g009190.2.1	Tomato	plastid	82.56	36.76
AT2G36390.1	Thale cress	plastid	79.74	36.25
KRG96156	Soybean	mitochondrion	78.97	35.4
CDY43722	Canola	plastid	80.77	29.86
Zm00001d003817_P002	Maize	plastid	81.03	29.1
GSMUA_Achr4P04690_001	Banana	cytoskeleton, cytosol, vacuole	55.38	26.87
GSMUA_Achr6P13530_001	Banana	plastid	33.59	14.43
GSMUA_Achr5P16780_001	Banana	cytosol, nucleus, plastid	0.51	0.9
Os04t0409200-00	Rice	plastid	0.0	0.0
GSMUA_Achr5P16770_001	Banana	cytosol, nucleus, plastid	0.0	0.0

Protein Annotations

KEGG:00500+2.4.1.18	Gene3D:2.60.40.1180	MapMan:3.2.2.5	Gene3D:3.20.20.80	InterPro:A-amylase/branching_C	InterPro:Branching_enzy
GO:GO:0003674	GO:GO:0003824	GO:GO:0003844	GO:GO:0005488	GO:GO:0005975	GO:GO:0005978
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
GO:GO:0043169	EnsemblPlantsGene:GSMUA_Achr5G16760_001	EnsemblPlants:GSMUA_Achr5P16760_001	EnsemblPlants:GSMUA_Achr5T16760_001	InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF
InterPro:IPR013780	UniProt:M0SZ55	PFAM:PF02806	PANTHER:PTHR43651	PANTHER:PTHR43651:SF1	SUPFAM:SSF51011
SUPFAM:SSF51445	UniParc:UPI00029556AD	:	:	:	:

Description

1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic [Source:GMGC_GENE;Acc:GSMUA_Achr5G16760_001]

Coordinates

chr5:-:15277023..15295164

Molecular Weight (calculated)

45436.0 Da

IEP (calculated)

5.058

GRAVY (calculated)

-0.333

Length

390 amino acids

Sequence
(BLAST)

001: MWDSRLFNYG SWEVLRFLLS NARWWLEEYK FDGFRFDGVT SMMYTHHGLA VSFTGNYSEY FGYATDVDAV AFLMLVNDMI HGLYPEAVTI GEDVSGMPTF
101: CIPVQDGGVG FEYRLHMAIP DKWIEMMKLK DEDWKMGEIV HNLTNRRWLE KCVAYAESHD QALVGDKTIA FWLMDKDMYD FMALNRPATP RIDRGIALHK
201: MIRLVTMGLG GEGYLNFMGN EFGHPEWIDF PRGDQHLPNG AVIPGNNYSY DKCRRMFDLG DADYLRYRGM HEFDQAMQHL EEQYGFMTSE HQYISRKDEG
301: DKMIIFERGN LVFVFNFHWS NSYFNYQVGC LKPGKFKVVL DSDDKLFGGF NRIDHTAEYF STEGLFDNRP RSFLVFAPSR TAVVYALSED

Best Arabidopsis Sequence Match ( AT5G03650.1 )
(BLAST)

001: MVVIHGVSLT PRFTLPSRPL NTGFNAGNST LSFFFKKHPL SRKIFAGKQS AEFDSSSQAI SASEKVLVPD NLDDDPRGFS QIFDLESQTM EYTEAVRTED
101: QTMNVVKERG VKPRIVPPPG DGKKIYEIDP MLRTYNNHLD YRYGQYKRLR EEIDKYEGGL EAFSRGYEKL GFSRSDAGIT YREWAPGAKA ASLIGDFNNW
201: NSNADIMTRN EFGVWEIFLP NNTDGSPAIP HGSRVKIRMD TPSGIKDSIP AWIKFSVQAP GEIPFNGIYY DPPEEEKYVF KHPQPKRPKS LRIYEAHVGM
301: SSTEPMVNTY ANFRDDVLPR IKKLGYNAVQ IMAIQEHSYY ASFGYHVTNF FAPSSRCGTP EELKSLIDRA HELGLVVLMD IVHSHASKNT LDGLNMFDGT
401: DAHYFHSGPR GYHWMWDSRL FNYGSWEVLR YLLSNARWWL EEYKFDGFRF DGVTSMMYTH HGLSVGFTGN YTEYFGLETD VDAVNYLMLV NDMIHGLYPE
501: AITVGEDVSG MPTFCIPVQD GGVGFDYRLH MAIADKWIEM LKKRDEDWQM GDIIYTLTNR RWSEKCISYA ESHDQALVGD KTIAFWLMDK DMYDFMAVDR
601: PSTPLIDRGI ALHKMIRLIT MGLGGEGYLN FMGNEFGHPE WIDFPRGEQR LSDGSVIPGN NFSYDKCRRR FDLGDADYLR YRGLQEFDQA MQHLEENYGF
701: MTSEHQFISR KDEADRVIVF ERGDLVFVFN FHWTSSYFDY RIGCSKPGKY KIVLDSDDPL FGGFNRLDRK AEYFTYDGLY DERPCSFMVY APCRTAVVYA
801: LANHD

Arabidopsis Description

SBE2.21,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LZS3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.