Factsheet for HORVU2Hr1G077120.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G310300.2	Wheat	plastid	95.05	94.48
TraesCS2D01G308600.1	Wheat	plastid	94.57	93.78
TraesCS2B01G327300.4	Wheat	golgi	94.33	93.54
GSMUA_Achr5P16770_001	Banana	cytosol, nucleus, plastid	7.0	87.88
HORVU2Hr1G072500.34	Barley	cytosol	63.93	86.18
GSMUA_Achr5P16760_001	Banana	cytosol	37.39	79.49
Os02t0528200-01	Rice	plastid	77.56	77.94
EES06902	Sorghum	plastid	75.27	77.71
Zm00001d016684_P005	Maize	plastid	71.89	74.22
AT5G03650.1	Thale cress	plastid	66.47	68.45
CDX70296	Canola	plastid	68.03	67.38
CDY10367	Canola	plastid	67.79	67.14
GSMUA_Achr6P07530_001	Banana	mitochondrion	68.76	66.9
Bra009521.1-P	Field mustard	plastid	68.28	66.51
KRH67868	Soybean	mitochondrion	69.0	65.75
VIT_08s0007g03750.t01	Wine grape	plastid	67.79	65.42
KRG96156	Soybean	mitochondrion	67.67	64.48
CDX84127	Canola	plastid	65.38	64.45
CDX75040	Canola	plastid	65.38	64.14
Bra005269.1-P	Field mustard	plastid	65.26	64.02
AT2G36390.1	Thale cress	plastid	65.26	63.05
Solyc09g009190.2.1	Tomato	plastid	66.34	62.79
HORVU0Hr1G022790.5	Barley	cytosol, plastid	31.73	51.57
CDY43722	Canola	plastid	65.26	51.28
HORVU0Hr1G022780.8	Barley	cytosol, plastid	31.12	42.72
HORVU0Hr1G022810.3	Barley	mitochondrion	49.1	42.35
HORVU7Hr1G082830.1	Barley	plastid	22.44	25.73
HORVU7Hr1G082850.6	Barley	cytosol, plastid	7.24	24.49
GSMUA_Achr5P16780_001	Banana	cytosol, nucleus, plastid	5.79	21.62

Protein Annotations

KEGG:00500+2.4.1.18	Gene3D:2.60.40.10	Gene3D:2.60.40.1180	MapMan:3.2.2.5	Gene3D:3.20.20.80	InterPro:A-amylase/branching_C
UniProt:A0A287IIY0	InterPro:Branching_enzy	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0003844
GO:GO:0004553	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005975	GO:GO:0005978	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009536	GO:GO:0009987	GO:GO:0016740	GO:GO:0016787	GO:GO:0043169	GO:GO:0102752
InterPro:Glyco_hydro_13_N	InterPro:Glyco_hydro_13_cat_dom	InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	EnsemblPlantsGene:HORVU2Hr1G077120	EnsemblPlants:HORVU2Hr1G077120.1
InterPro:IPR013780	InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set	PFAM:PF00128	PFAM:PF02806
PFAM:PF02922	PIRSF:PIRSF000463	PANTHER:PTHR43651	PANTHER:PTHR43651:SF1	SMART:SM00642	SUPFAM:SSF51011
SUPFAM:SSF51445	SUPFAM:SSF81296	UniParc:UPI00000A4998	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr2H:-:558171214..558193297

Molecular Weight (calculated)

93608.0 Da

IEP (calculated)

6.052

GRAVY (calculated)

-0.473

Length

829 amino acids

Sequence
(BLAST)

001: MAAPAFAVSA AGIARPSARR SSGAEPRSLL FGRNKGTRFP RAVGVGGSGW RVVMRAGGPS GEVMIPDGGS GGSGTPPSIE GSVQFESDDL EVPFIDDEPS
101: LHDGGEDTIR SSETYQVTEE IDAEGVSRMD KESSTVKKIR IVPQPGNGQQ IYDIDPMLRD FKYHLEYRYS LYRRIRSDID EYDGGMDVFS RGYEKFGFVR
201: SAEGITYREW APGADSAALV GDFNNWDPTA DHMSKNDLGI WEIFLPNNAD GSPPIPHGSR VKVRMDTPSG TKDSIPAWIK YSVQTPGDIP YNGIYYDPPE
301: EEKYVFKHPQ PKRPKSLRIY ETHVGMSSPE PKINTYANFR DEVLPRIKRL GYNAVQIMAI QEHSYYGSFG YHVTNFFAPS SRFGSPEDLK SLIDRAHELG
401: LLVLMDVVHS HASSNTLDGL NGFDGTDTHY FHGGSRGHHW MWDSRVFNYG NKEVIRFLLS NARWWLEEYK FDGFRFDGAT SMMYTHHGLQ VTFTGSYHEY
501: FGFATDVDAV VYLMLVNDLI HALYPEAVTI GEDVSGMPTF ALPVQVGGVG FDYRLHMAVA DKWIELLKGS DEGWEMGNIV HTLTNRRWLE KCVTYAESHD
601: QALVGDKTIA FWLMDKDMYD FMALNGPSTP NIDRGIALHK MIRLITMALG GEGYLNFMGN EFGHPEWIDF PRGPQVLPTG KFIPGNNNSY DKCRRRFDLG
701: DAEFLRYHGM QQFDQAMQHL EEKYGFMTSD HQYVSRKHEE DKVIVFEKGD LVFVFNFHWS NSYFDYRVGC LKPGKYKVVL DSDAGLFGGF GRIHHTGEHF
801: TNGCQHDNRP HSFSVYTPSR TCVVYAPMN

Best Arabidopsis Sequence Match ( AT5G03650.1 )
(BLAST)

001: MVVIHGVSLT PRFTLPSRPL NTGFNAGNST LSFFFKKHPL SRKIFAGKQS AEFDSSSQAI SASEKVLVPD NLDDDPRGFS QIFDLESQTM EYTEAVRTED
101: QTMNVVKERG VKPRIVPPPG DGKKIYEIDP MLRTYNNHLD YRYGQYKRLR EEIDKYEGGL EAFSRGYEKL GFSRSDAGIT YREWAPGAKA ASLIGDFNNW
201: NSNADIMTRN EFGVWEIFLP NNTDGSPAIP HGSRVKIRMD TPSGIKDSIP AWIKFSVQAP GEIPFNGIYY DPPEEEKYVF KHPQPKRPKS LRIYEAHVGM
301: SSTEPMVNTY ANFRDDVLPR IKKLGYNAVQ IMAIQEHSYY ASFGYHVTNF FAPSSRCGTP EELKSLIDRA HELGLVVLMD IVHSHASKNT LDGLNMFDGT
401: DAHYFHSGPR GYHWMWDSRL FNYGSWEVLR YLLSNARWWL EEYKFDGFRF DGVTSMMYTH HGLSVGFTGN YTEYFGLETD VDAVNYLMLV NDMIHGLYPE
501: AITVGEDVSG MPTFCIPVQD GGVGFDYRLH MAIADKWIEM LKKRDEDWQM GDIIYTLTNR RWSEKCISYA ESHDQALVGD KTIAFWLMDK DMYDFMAVDR
601: PSTPLIDRGI ALHKMIRLIT MGLGGEGYLN FMGNEFGHPE WIDFPRGEQR LSDGSVIPGN NFSYDKCRRR FDLGDADYLR YRGLQEFDQA MQHLEENYGF
701: MTSEHQFISR KDEADRVIVF ERGDLVFVFN FHWTSSYFDY RIGCSKPGKY KIVLDSDDPL FGGFNRLDRK AEYFTYDGLY DERPCSFMVY APCRTAVVYA
801: LANHD

Arabidopsis Description

SBE2.21,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LZS3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.