Factsheet for TraesCS2A01G293400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, vacuole
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	vacuole
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G072500.34	Barley	cytosol	73.31	98.7
TraesCS2B01G309500.3	Wheat	plastid	96.5	96.5
TraesCS2D01G290800.4	Wheat	plastid	95.65	96.0
GSMUA_Achr5P16770_001	Banana	cytosol, nucleus, plastid	7.13	89.39
GSMUA_Achr5P16760_001	Banana	cytosol	39.37	83.59
OQU81503	Sorghum	plastid	79.23	79.32
Os04t0409200-00	Rice	plastid	23.07	74.9
TraesCS2A01G310300.2	Wheat	plastid	73.79	73.26
AT5G03650.1	Thale cress	plastid	70.29	72.3
GSMUA_Achr6P07530_001	Banana	mitochondrion	72.58	70.54
CDY10367	Canola	plastid	71.26	70.49
CDX70296	Canola	plastid	70.89	70.13
Bra009521.1-P	Field mustard	plastid	71.14	69.21
KRH67868	Soybean	mitochondrion	72.1	68.62
VIT_08s0007g03750.t01	Wine grape	plastid	70.05	67.52
CDX84127	Canola	plastid	68.48	67.42
KRG96156	Soybean	mitochondrion	70.77	67.36
Bra005269.1-P	Field mustard	plastid	68.12	66.75
Solyc09g009190.2.1	Tomato	plastid	70.53	66.67
CDX75040	Canola	plastid	68.0	66.63
AT2G36390.1	Thale cress	plastid	67.87	65.5
Zm00001d003817_P002	Maize	plastid	79.23	60.41
CDY43722	Canola	plastid	68.12	53.46
TraesCS7A01G549100.2	Wheat	plastid	48.67	47.64
TraesCS7A01G549200.1	Wheat	plastid	35.63	46.46
TraesCS7A01G549300.2	Wheat	plastid	32.73	42.02
GSMUA_Achr5P16780_001	Banana	cytosol, nucleus, plastid	8.21	30.63
TraesCS7A01G336400.1	Wheat	plastid	30.43	27.57

Protein Annotations

KEGG:00500+2.4.1.18	Gene3D:2.60.40.10	Gene3D:2.60.40.1180	MapMan:3.2.2.5	Gene3D:3.20.20.80	InterPro:A-amylase/branching_C
InterPro:Branching_enzy	GO:GO:0003674	GO:GO:0003824	GO:GO:0003844	GO:GO:0004553	GO:GO:0005488
GO:GO:0005975	GO:GO:0005978	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	GO:GO:0016787	GO:GO:0043169	InterPro:Glyco_hydro_13_N	InterPro:Glyco_hydro_13_cat_dom
InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set
PFAM:PF00128	PFAM:PF02806	PFAM:PF02922	PIRSF:PIRSF000463	PANTHER:PTHR43651	PANTHER:PTHR43651:SF1
SMART:SM00642	SUPFAM:SSF51011	SUPFAM:SSF51445	SUPFAM:SSF81296	EnsemblPlantsGene:TraesCS2A01G293400	EnsemblPlants:TraesCS2A01G293400.1
TIGR:cd02854	TIGR:cd11321	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2A:+:504334462..504344354

Molecular Weight (calculated)

93634.0 Da

IEP (calculated)

5.423

GRAVY (calculated)

-0.481

Length

828 amino acids

Sequence
(BLAST)

001: MATFAVSGAT LGVARPAGAG GGLLPRSGSE RRGGVDLPSL LLRKKDSSRA VLSRAASPGK VLVPDGESDD LASPAQPEEL QIPEDIEEQT AEVNMTGGTA
101: EKLESSEPTQ GIVETITDGV TKGVKELVVG EKPRVVPKPG DGQKIYEIDP TLKDFRSHLD YRYSEYRRIR AAIDQHEGGL EAFSRGYEKL GFTRSAEGIT
201: YREWAPGAHS AALVGDFNNW NPNADTMTRD DYGVWEIFLP NNADGSPAIP HGSRVKIRMD TPSGVKDSIS AWIKFSVQAP GEIPFNGIYY DPPEEEKYVF
301: QHPQPKRPES LRIYESHIGM SSPWDLAQEP KINSYANFRD EVLPRIKRLG YNAVQIMAIQ EHSYYASFGY HVTNFFAPSS RFGTPEDLKS LIDRAHELGL
401: LVLMDIVHSH SSNNTLDGLN GFDGTDTHYF HGGPRGHHWM WDSRLFNYGS WEVLRFLLSN ARWWLEEYKF DGFRFDGVTS MMYTHHGLQM TFTGNYGEYF
501: GFATDVDAVV YLMLVNDLIH GLYPDAVSIG EDVSGMPTFC IPVPDGGVGF DYRLHMAVAD KWIELLKQSD ESWKMGDIVH TLTNRRWLEK CVTYAESHDQ
601: ALVGDKTIAF WLMDKDMYDF MALDRPSTPR IDRGIALHKM IRLVTMGLGG EGYLNFMGNE FGHPEWIDFP RGPQTLPTGK VLPGNNNSYD KCRRRFDLGD
701: ADFLRYRGMQ EFDQAMQHLE EKYGFMTSEH QYVSRKHEED KVIIFERGDL VFVFNFHWSN SFFDYRVGCS RPGKYKVALD SDDALFGGFS RLDHDVDYFT
801: TEHPHDNRPR SFSVYTPSRT AVVYALTE

Best Arabidopsis Sequence Match ( AT2G36390.1 )
(BLAST)

001: MVYTISGVRF PHLPSIKKKN SSLHSFNEDL RRSNAVSFSL RKDSRSSGKV FARKPSYDSD SSSLATTASE KLRGHQSDSS SSASDQVQSR DTVSDDTQVL
101: GNVDVQKTEE AQETETLDQT SALSTSGSIS YKEDFAKMSH SVDQEVGQRK IPPPGDGKRI YDIDPMLNSH RNHLDYRYGQ YRKLREEIDK NEGGLEAFSR
201: GYEIFGFTRS ATGITYREWA PGAKAASLIG DFNNWNAKSD VMARNDFGVW EIFLPNNADG SPAIPHGSRV KIRMDTPSGI KDSIPAWIKY SVQPPGEIPY
301: NGVYYDPPEE DKYAFKHPRP KKPTSLRIYE SHVGMSSTEP KINTYANFRD DVLPRIKKLG YNAVQIMAIQ EHAYYASFGY HVTNFFAPSS RFGTPDDLKS
401: LIDKAHELGL VVLMDIVHSH ASKNTLDGLD MFDGTDGQYF HSGSRGYHWM WDSRLFNYGS WEVLRYLLSN ARWWLEEYKF DGFRFDGVTS MMYTHHGLQV
501: EFTGNYNEYF GYSTDVDAVV YLMLVNDLIH GLYPEAIVVG EDVSGMPAFC VPVEDGGVGF DYRLHMAVAD KWIELLKKRD EDWQVGDITF TLTNRRWGEK
601: CVVYAESHDQ ALVGDKTIAF WLMDKDMYDF MAVDRQATPR VDRGIALHKM IRLITMGLGG EGYLNFMGNE FGHPEWIDFP RTDQHLPDGR VIAGNNGSYD
701: KCRRRFDLGD AEYLRYHGLQ EFDRAMQNLE ETYGFMTSEH QYISRKDEGD RVIVFERGNL LFVFNFHWTN SYSDYRIGCS VPGKYKIVLD SDNSLFGGFN
801: RLDDSAEFFT SDGRHDDRPC SFMVYAPCRT AVVYAAVDDD DDDERSSLVP IGLLPEDV

Arabidopsis Description

SBE2.1SBE2.1 [Source:UniProtKB/TrEMBL;Acc:A0A178VXI8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.