Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG26411 | Sorghum | mitochondrion | 60.29 | 59.86 |
| TraesCS2A01G316800.1 | Wheat | nucleus | 58.84 | 59.27 |
| TraesCS2B01G334900.1 | Wheat | cytosol, nucleus, plastid | 59.08 | 59.08 |
| TraesCS2D01G314700.1 | Wheat | cytosol, nucleus, plastid | 57.87 | 57.73 |
| VIT_07s0031g03110.t01 | Wine grape | cytosol | 30.02 | 43.97 |
| Solyc01g088240.2.1 | Tomato | cytosol | 26.63 | 35.83 |
| PGSC0003DMT400017590 | Potato | cytosol | 26.88 | 35.58 |
| Os02t0757700-01 | Rice | cytosol | 23.0 | 29.32 |
| Os08t0269800-01 | Rice | cytosol | 10.17 | 27.1 |
| Os06t0219700-01 | Rice | cytosol | 20.1 | 26.18 |
| CDY39232 | Canola | cytosol | 1.21 | 20.83 |
Protein Annotations
| Gene3D:1.20.1280.50 | EntrezGene:107276229 | MapMan:19.2.2.8.1.4.6 | Gene3D:3.80.10.10 | ProteinID:BAS89433.1 | ProteinID:CAD40870.2 |
| ProteinID:EAZ30896.1 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001810 | InterPro:IPR032675 | InterPro:LRR_dom_sf | EnsemblPlantsGene:Os04g0448700 | EnsemblPlants:Os04t0448700-00 | PFAM:PF12937 |
| PANTHER:PTHR44841 | PANTHER:PTHR44841:SF1 | UniProt:Q7XV23 | SUPFAM:SSF52047 | SUPFAM:SSF81383 | UniParc:UPI00001B0C14 |
| RefSeq:XP_015635252.1 | SEG:seg | : | : | : | : |
Description
Similar to H0818E04.4 protein. (Os04t0448700-00)
Coordinates
chr4:-:22358725..22361651
Molecular Weight (calculated)
44546.4 Da
IEP (calculated)
5.150
GRAVY (calculated)
-0.399
Length
413 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRCGSSSGG RFTGGGGQKG RWPGFEGKRA APVVKWSHAE AMKKKPSGRG DAAVTGDGGG WMRRLEEEEA GLELDGSCWG SWSEAAATRA SGTATGGAGK
101: HVRFRPEAEA EAKRERPFDA GEWGGGGGGE VGGDGGEGRM YEWRWTEAVS PEILALILRG RVDADEVARG AARVCRAWRE AAAAPDVWGD VDIEAWCRRV
201: NCRPRADAAV RRLVALARGT LRQLSAYRVG DAALAYVAAS GKLLNVLQIP MSEISDQAVK KYAEFLPALR VLDISNCLKI SSSGIEALGR HCKLLVQLKR
301: NMPPPDVPHG YNAVPNVVND EALAIANTMP VLEHLELAYG LFSDTGLGAI LTRCPRLQTL DILGCWNVRL EGDIELRCCA LESFREPWEP MYSDCSSTGS
401: DNDDDDEDND SDN
101: HVRFRPEAEA EAKRERPFDA GEWGGGGGGE VGGDGGEGRM YEWRWTEAVS PEILALILRG RVDADEVARG AARVCRAWRE AAAAPDVWGD VDIEAWCRRV
201: NCRPRADAAV RRLVALARGT LRQLSAYRVG DAALAYVAAS GKLLNVLQIP MSEISDQAVK KYAEFLPALR VLDISNCLKI SSSGIEALGR HCKLLVQLKR
301: NMPPPDVPHG YNAVPNVVND EALAIANTMP VLEHLELAYG LFSDTGLGAI LTRCPRLQTL DILGCWNVRL EGDIELRCCA LESFREPWEP MYSDCSSTGS
401: DNDDDDEDND SDN
001: MEEDCEFRHW DELIPDALGL IFSHLPLQEV LTVVPRVCKA WNRAVTGPYC WQEIDIELWS NRFHQSDHLD RMLEMLIPRS AGSLRKLSVT GLRNDSIFSF
101: IAQHAGSLKT LKVPRSGLTN SGVVNVAEKL SSLTFLDLSY CCKIGPEAIQ AIGKHCKSLR EFCRNMHPLD VASVVSHDDE AYAIANTMPK LKRLEIAYHR
201: VSTEGVLKIL SCCVFLEFLE LRGCWDVQLD NKFFKEKFPD MKVLGPRVIG FYDMINDWED CCSDYFSDGS DYLAWEFFED GVMGEFYEDE FEHGWDDNFY
301: AENAVLDMEP HIWPPSP
101: IAQHAGSLKT LKVPRSGLTN SGVVNVAEKL SSLTFLDLSY CCKIGPEAIQ AIGKHCKSLR EFCRNMHPLD VASVVSHDDE AYAIANTMPK LKRLEIAYHR
201: VSTEGVLKIL SCCVFLEFLE LRGCWDVQLD NKFFKEKFPD MKVLGPRVIG FYDMINDWED CCSDYFSDGS DYLAWEFFED GVMGEFYEDE FEHGWDDNFY
301: AENAVLDMEP HIWPPSP
Arabidopsis Description
FBW2FBW2 [Source:UniProtKB/TrEMBL;Acc:A0A178UUC5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.