Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G334900.1 | Wheat | cytosol, nucleus, plastid | 94.15 | 93.46 |
| TraesCS2D01G314700.1 | Wheat | cytosol, nucleus, plastid | 90.0 | 89.13 |
| Os04t0448700-00 | Rice | mitochondrion | 59.27 | 58.84 |
| KXG26411 | Sorghum | mitochondrion | 56.59 | 55.77 |
| VIT_07s0031g03110.t01 | Wine grape | cytosol | 30.49 | 44.33 |
| Solyc01g088240.2.1 | Tomato | cytosol | 26.83 | 35.83 |
| PGSC0003DMT400017590 | Potato | cytosol | 25.85 | 33.97 |
| TraesCS6A01G316400.1 | Wheat | cytosol | 19.51 | 24.17 |
| TraesCS3A01G490000.1 | Wheat | cytosol, golgi, nucleus | 19.02 | 23.21 |
| TraesCS7A01G178000.1 | Wheat | cytosol | 18.05 | 22.77 |
| TraesCS1A01G056500.2 | Wheat | cytosol | 18.78 | 21.94 |
| CDY39232 | Canola | cytosol | 0.98 | 16.67 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G316800.1 | EnsemblPlantsGene:TraesCS2A01G316800 | Gene3D:3.80.10.10 | InterPro:IPR032675 | InterPro:LRR_dom_sf | PANTHER:PTHR44841 |
| PANTHER:PTHR44841:SF1 | SEG:seg | SUPFAM:SSF52047 | MapMan:19.2.2.8.1.4.6 | : | : |
Description
No Description!
Coordinates
chr2A:-:542555114..542557556
Molecular Weight (calculated)
44455.4 Da
IEP (calculated)
4.763
GRAVY (calculated)
-0.443
Length
410 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRRNPTSGA GFPRGEGPGW EAKRERPNGG WRGRLTAPVV KWSHAEAMKK KPKVGGGAAL VADGGGWRME TEAEMAGLDG RSCGRGGFLG TSWSEAAENS
101: ADAATGGGEN EWCLPQTEKA TPCEAVEGGG GGDVRGDEVK EELYDWRWTE AASPEIMALI LRGRFAADEI ARGPAAVCRA WREAAASPDM WGDVDIEAWC
201: RRVKCRVKAD AAVRRLVARS QGTIRGLSAY RVGDAALAYV AASGKLLNVL QIPMSEISDQ AVEKYVKCFP ALRVLDISYC EKVTSRGMEA IGRQCKSLAQ
301: LKRNMPPEDN NAAPKVVEDE ALAVANTMPM LKQLELAYGL FSDVGLDAIL TKCPLLRTLD ILGSLNVRLD GDIEERCCAL ESFREPWEPD YHENSSSGGD
401: YDYDDTESDD
101: ADAATGGGEN EWCLPQTEKA TPCEAVEGGG GGDVRGDEVK EELYDWRWTE AASPEIMALI LRGRFAADEI ARGPAAVCRA WREAAASPDM WGDVDIEAWC
201: RRVKCRVKAD AAVRRLVARS QGTIRGLSAY RVGDAALAYV AASGKLLNVL QIPMSEISDQ AVEKYVKCFP ALRVLDISYC EKVTSRGMEA IGRQCKSLAQ
301: LKRNMPPEDN NAAPKVVEDE ALAVANTMPM LKQLELAYGL FSDVGLDAIL TKCPLLRTLD ILGSLNVRLD GDIEERCCAL ESFREPWEPD YHENSSSGGD
401: YDYDDTESDD
001: MEEDCEFRHW DELIPDALGL IFSHLPLQEV LTVVPRVCKA WNRAVTGPYC WQEIDIELWS NRFHQSDHLD RMLEMLIPRS AGSLRKLSVT GLRNDSIFSF
101: IAQHAGSLKT LKVPRSGLTN SGVVNVAEKL SSLTFLDLSY CCKIGPEAIQ AIGKHCKSLR EFCRNMHPLD VASVVSHDDE AYAIANTMPK LKRLEIAYHR
201: VSTEGVLKIL SCCVFLEFLE LRGCWDVQLD NKFFKEKFPD MKVLGPRVIG FYDMINDWED CCSDYFSDGS DYLAWEFFED GVMGEFYEDE FEHGWDDNFY
301: AENAVLDMEP HIWPPSP
101: IAQHAGSLKT LKVPRSGLTN SGVVNVAEKL SSLTFLDLSY CCKIGPEAIQ AIGKHCKSLR EFCRNMHPLD VASVVSHDDE AYAIANTMPK LKRLEIAYHR
201: VSTEGVLKIL SCCVFLEFLE LRGCWDVQLD NKFFKEKFPD MKVLGPRVIG FYDMINDWED CCSDYFSDGS DYLAWEFFED GVMGEFYEDE FEHGWDDNFY
301: AENAVLDMEP HIWPPSP
Arabidopsis Description
FBW2FBW2 [Source:UniProtKB/TrEMBL;Acc:A0A178UUC5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.