Factsheet for TraesCS3A01G490000.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, nucleus, cytosol

Predictor Summary:

golgi 1
mitochondrion 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, nucleus
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G550600.1	Wheat	cytosol	79.17	84.18
TraesCS7A01G178000.1	Wheat	cytosol	67.86	70.15
Os06t0219700-01	Rice	cytosol	64.88	68.77
HORVU3Hr1G108730.1	Barley	cytosol, golgi, mitochondrion	75.3	65.21
GSMUA_Achr6P30460_001	Banana	cytosol	56.55	58.82
GSMUA_Achr3P06570_001	Banana	cytosol	54.76	57.32
GSMUA_Achr9P14880_001	Banana	cytosol	53.87	56.39
GSMUA_AchrUn_...	Banana	cytosol	52.98	55.45
TraesCS6A01G316400.1	Wheat	cytosol	53.27	54.08
HORVU7Hr1G122060.1	Barley	cytosol	27.68	51.96
VIT_00s0391g00040.t01	Wine grape	cytosol	45.54	48.27
HORVU7Hr1G121910.1	Barley	cytosol	12.5	47.73
VIT_18s0001g06220.t01	Wine grape	cytosol	40.48	46.58
AT4G08980.2	Thale cress	cytosol	42.86	45.43
CDY05035	Canola	cytosol	41.96	44.34
CDX90703	Canola	cytosol	41.96	44.34
Bra000662.1-P	Field mustard	cytosol	41.96	44.34
KRH62319	Soybean	cytosol	42.26	44.24
PGSC0003DMT400041822	Potato	cytosol	42.26	44.24
Bra038402.1-P	Field mustard	cytosol	41.67	44.16
KRH53038	Soybean	cytosol	41.96	43.93
CDY51578	Canola	cytosol	37.5	43.75
CDX75124	Canola	cytosol	36.9	43.51
Solyc11g009050.1.1	Tomato	cytosol	42.56	43.33
PGSC0003DMT400043293	Potato	cytosol	26.79	42.45
TraesCS2A01G316800.1	Wheat	nucleus	23.21	19.02
TraesCS1A01G056500.2	Wheat	cytosol	19.05	18.23

Protein Annotations

EnsemblPlants:TraesCS3A01G490000.1	EnsemblPlantsGene:TraesCS3A01G490000	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_dom_sf	PANTHER:PTHR44841
PANTHER:PTHR44841:SF3	SUPFAM:SSF52047	MapMan:19.2.2.8.1.4.6	:	:	:

Description

No Description!

Coordinates

chr3A:-:717623310..717626557

Molecular Weight (calculated)

37826.6 Da

IEP (calculated)

4.340

GRAVY (calculated)

-0.236

Length

336 amino acids

Sequence
(BLAST)

001: MFLAGGHTTC MVGPGSEGSR MEEYSEDRCW EDLARGALGI IFCKLSLQEI LTVVLGICKP WSRVVSGPDC WQDIDIQEWS QQSEPDKITS MVHMLLSRSA
101: GSCHRLSVSR LPNDSLFAFI ADHAQSLKTL EISRSEISDG IVEDVAQRLT KVTFLDVSGC TKIGARALEA FGKNCKSLVR LRRVMHPMDV AGKVSHNDEA
201: RAIPYNMPKL CHLDIGYMLI GTTDVVEIAS QCQDLKFLDL RGCWDVDDKI LQEKYPGLKI LGPRVNDCYE NSFWDECSDD DSIYSWEEFT DDDYFVIESD
301: DEAIWDHDHS FEGLEVRFYG GVFGEGFAGF DWPESP

Best Arabidopsis Sequence Match ( AT4G08980.1 )
(BLAST)

001: MEEDCEFRHW DELIPDALGL IFSHLPLQEV LTVVPRVCKA WNRAVTGPYC WQEIDIELWS NRFHQSDHLD RMLEMLIPRS AGSLRKLSVT GLRNDSIFSF
101: IAQHAGSLKT LKVPRSGLTN SGVVNVAEKL SSLTFLDLSY CCKIGPEAIQ AIGKHCKSLR EFCRNMHPLD VASVVSHDDE AYAIANTMPK LKRLEIAYHR
201: VSTEGVLKIL SCCVFLEFLE LRGCWDVQLD NKFFKEKFPD MKVLGPRVIG FYDMINDWED CCSDYFSDGS DYLAWEFFED GVMGEFYEDE FEHGWDDNFY
301: AENAVLDMEP HIWPPSP

Arabidopsis Description

FBW2FBW2 [Source:UniProtKB/TrEMBL;Acc:A0A178UUC5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.