Factsheet for TraesCS3B01G550600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G490000.1	Wheat	cytosol, golgi, nucleus	84.18	79.17
TraesCS7B01G083700.1	Wheat	cytosol	70.57	69.04
Os06t0219700-01	Rice	cytosol	67.72	67.51
HORVU3Hr1G108730.1	Barley	cytosol, golgi, mitochondrion	75.95	61.86
TraesCS6B01G347000.1	Wheat	cytosol	58.86	56.88
GSMUA_Achr9P14880_001	Banana	cytosol	56.65	55.76
GSMUA_Achr6P30460_001	Banana	cytosol	56.65	55.42
GSMUA_Achr3P06570_001	Banana	cytosol	55.7	54.83
GSMUA_AchrUn_...	Banana	cytosol	54.11	53.27
HORVU7Hr1G122060.1	Barley	cytosol	27.22	48.04
VIT_00s0391g00040.t01	Wine grape	cytosol	47.15	47.0
VIT_18s0001g06220.t01	Wine grape	cytosol	41.77	45.21
AT4G08980.2	Thale cress	cytosol	44.62	44.48
PGSC0003DMT400041822	Potato	cytosol	44.3	43.61
CDY05035	Canola	cytosol	43.67	43.4
CDX90703	Canola	cytosol	43.67	43.4
Bra000662.1-P	Field mustard	cytosol	43.67	43.4
KRH62319	Soybean	cytosol	43.99	43.3
Bra038402.1-P	Field mustard	cytosol	43.35	43.22
KRH53038	Soybean	cytosol	43.67	42.99
Solyc11g009050.1.1	Tomato	cytosol	44.62	42.73
CDY51578	Canola	cytosol	38.92	42.71
CDX75124	Canola	cytosol	38.29	42.46
HORVU7Hr1G121910.1	Barley	cytosol	11.71	42.05
PGSC0003DMT400043293	Potato	cytosol	26.27	39.15
TraesCS1B01G073600.1	Wheat	cytosol	18.35	18.59
TraesCS2B01G334900.1	Wheat	cytosol, nucleus, plastid	22.15	16.95

Protein Annotations

EnsemblPlants:TraesCS3B01G550600.1	EnsemblPlantsGene:TraesCS3B01G550600	Gene3D:1.20.1280.50	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:F-box-like_dom_sf	InterPro:IPR032675	InterPro:LRR_dom_sf	PANTHER:PTHR44841	PANTHER:PTHR44841:SF3
SUPFAM:SSF52047	SUPFAM:SSF81383	MapMan:19.2.2.8.1.4.6	:	:	:

Description

No Description!

Coordinates

chr3B:-:785462247..785469144

Molecular Weight (calculated)

35742.2 Da

IEP (calculated)

4.395

GRAVY (calculated)

-0.208

Length

316 amino acids

Sequence
(BLAST)

001: MEECSEDRCW EDLARDALGL IFCKLSLQEI LTVVPGVCKP WSRVVSGADC WQDIDIQEWS QQSEPDKITR MVHMLLSHSA GSCHRLSVSR LPNDSLFAFI
101: ADHAQSLKTV EIPRSEISEY IVEDVAQRLT KVTFLDVSSC TKIGARALGA FGKNCQSLVR LRRVMHPMDV GGKVCHNDEA RAIAYNMPKL RHLEIGYMII
201: ATTAVVEITS RCEDLKFVDL RGYWDVDDKV LQEKYPGLKI VAPHVDDCYE NGLWDECSDD DSIDSWEEFV DNDYFAIRSD DEAIWDDIHA LEVLEVSFYG
301: GVFREGFAGY GSPESP

Best Arabidopsis Sequence Match ( AT4G08980.1 )
(BLAST)

001: MEEDCEFRHW DELIPDALGL IFSHLPLQEV LTVVPRVCKA WNRAVTGPYC WQEIDIELWS NRFHQSDHLD RMLEMLIPRS AGSLRKLSVT GLRNDSIFSF
101: IAQHAGSLKT LKVPRSGLTN SGVVNVAEKL SSLTFLDLSY CCKIGPEAIQ AIGKHCKSLR EFCRNMHPLD VASVVSHDDE AYAIANTMPK LKRLEIAYHR
201: VSTEGVLKIL SCCVFLEFLE LRGCWDVQLD NKFFKEKFPD MKVLGPRVIG FYDMINDWED CCSDYFSDGS DYLAWEFFED GVMGEFYEDE FEHGWDDNFY
301: AENAVLDMEP HIWPPSP

Arabidopsis Description

FBW2FBW2 [Source:UniProtKB/TrEMBL;Acc:A0A178UUC5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.