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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU7Hr1G122060.1 Barley cytosol 98.86 48.6
HORVU6Hr1G077730.1 Barley mitochondrion 36.36 12.6
TraesCS3A01G490000.1 Wheat cytosol, golgi, nucleus 47.73 12.5
TraesCS3B01G550600.1 Wheat cytosol 42.05 11.71
Os06t0219700-01 Rice cytosol 40.91 11.36
VIT_18s0001g06220.t01 Wine grape cytosol 37.5 11.3
HORVU7Hr1G036660.5 Barley cytosol 40.91 10.84
GSMUA_AchrUn_... Banana cytosol 38.64 10.59
GSMUA_Achr6P30460_001 Banana cytosol 38.64 10.53
GSMUA_Achr9P14880_001 Banana cytosol 37.5 10.28
VIT_00s0391g00040.t01 Wine grape cytosol 36.36 10.09
HORVU3Hr1G108730.1 Barley cytosol, golgi, mitochondrion 43.18 9.79
GSMUA_Achr3P06570_001 Banana cytosol 35.23 9.66
PGSC0003DMT400041822 Potato cytosol 35.23 9.66
Solyc11g009050.1.1 Tomato cytosol 35.23 9.39
PGSC0003DMT400043293 Potato cytosol 21.59 8.96
KRH53038 Soybean cytosol 30.68 8.41
KRH62319 Soybean cytosol 30.68 8.41
CDX75124 Canola cytosol 26.14 8.07
CDY51578 Canola cytosol 26.14 7.99
Bra038402.1-P Field mustard cytosol 26.14 7.26
Bra000662.1-P Field mustard cytosol 26.14 7.23
CDX90703 Canola cytosol 26.14 7.23
CDY05035 Canola cytosol 26.14 7.23
HORVU6Hr1G077670.2 Barley cytosol, mitochondrion 29.55 7.22
AT4G08980.2 Thale cress cytosol 25.0 6.94
HORVU1Hr1G011370.2 Barley cytosol 21.59 5.16
HORVU7Hr1G122300.1 Barley mitochondrion 1.14 1.01
Protein Annotations
EnsemblPlants:HORVU7Hr1G121910.1EnsemblPlantsGene:HORVU7Hr1G121910UniParc:UPI0002964D5EUniProt:M0WMS2MapMan:35.2:
Description
No Description!
Coordinates
chrchr7H:-:654983118..654983381
Molecular Weight (calculated)
9673.5 Da
IEP (calculated)
4.909
GRAVY (calculated)
0.141
Length
88 amino acids
Sequence
(BLAST)
1: MDANRTSVMH NIYNTLFIDD PIHIILLNLA DATMFAFAIA QSLDTLGISR SEISDGLGED SAPRRPKVTF LHVSSYINYG ARALEAFG
Best Arabidopsis Sequence Match ( AT3G27440.1 )
(BLAST)
001: MEKLSNGVRD HCLISDYVSP SAPAPLKQPF VIGVAGGTAS GKTTVCNMIM SQLHDQRVVL VNQDSFYHSL TKEKLNKVHE YNFDHPDAFN TEVLLSCMEK
101: LRSGQPVNIP SYDFKIHQSI ESSSPVNPGD VIILEGILVL NDPRVRDLMN MKIFVDTDAD VRLSRRIQRD TVERGRNIQN VLEQYTKFVK PSFDEYIQPS
201: MKYADIIIPR GGDNDVAIDL IVQHIRTKLC QHNLCKIYSN IFIISSTFQI KGMHTLIRDI NTTKHDFVFY ADRLIRLVVE HGLGHLPFTE KQITTPTGSV
301: YTGVDFCKRL CGVSVIRSGE SMENALRACC NGIKIGKILI HRENNDGRQL IYEKLPKDIS SRHVFLLDPV LASGYSAVKA ITLLLSKGVP ESHIIFLNLI
401: AAPQGIHALC KKFPMLKIVT SEIDSSLNED SRVIPGLGEF ADRYFGTNNI NSKVSSLSTN LKLRS
Arabidopsis Description
UKL5Uridine kinase-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTY6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.