Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75124 | Canola | cytosol | 95.14 | 96.14 |
| Bra038402.1-P | Field mustard | cytosol | 99.65 | 90.54 |
| CDY05035 | Canola | cytosol | 93.06 | 84.28 |
| CDX90703 | Canola | cytosol | 91.67 | 83.02 |
| AT4G08980.2 | Thale cress | cytosol | 91.32 | 82.97 |
| KRH62319 | Soybean | cytosol | 57.29 | 51.4 |
| KRH53038 | Soybean | cytosol | 56.6 | 50.78 |
| VIT_18s0001g06220.t01 | Wine grape | cytosol | 48.96 | 48.29 |
| GSMUA_Achr6P30460_001 | Banana | cytosol | 50.69 | 45.2 |
| GSMUA_AchrUn_... | Banana | cytosol | 48.96 | 43.93 |
| GSMUA_Achr9P14880_001 | Banana | cytosol | 48.96 | 43.93 |
| GSMUA_Achr3P06570_001 | Banana | cytosol | 48.96 | 43.93 |
| TraesCS7D01G179800.1 | Wheat | cytosol | 47.57 | 42.41 |
| TraesCS7B01G083700.1 | Wheat | cytosol | 47.22 | 42.11 |
| TraesCS7A01G178000.1 | Wheat | cytosol | 47.22 | 41.85 |
| Os06t0219700-01 | Rice | cytosol | 45.49 | 41.32 |
| Os02t0757700-01 | Rice | cytosol | 45.49 | 40.43 |
| TraesCS6B01G347000.1 | Wheat | cytosol | 45.14 | 39.76 |
| Zm00001d052200_P001 | Maize | cytosol | 45.83 | 39.4 |
| TraesCS6A01G316400.1 | Wheat | cytosol | 45.14 | 39.27 |
| TraesCS3B01G550600.1 | Wheat | cytosol | 42.71 | 38.92 |
| HORVU7Hr1G036660.5 | Barley | cytosol | 44.79 | 38.86 |
| HORVU6Hr1G077730.1 | Barley | mitochondrion | 33.33 | 37.8 |
| TraesCS3A01G490000.1 | Wheat | cytosol, golgi, nucleus | 43.75 | 37.5 |
| EES07216 | Sorghum | cytosol, golgi, mitochondrion, plastid | 46.88 | 36.99 |
| Zm00001d018111_P002 | Maize | cytosol | 44.79 | 36.96 |
| HORVU7Hr1G122060.1 | Barley | cytosol | 21.53 | 34.64 |
| TraesCS6D01G296000.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion | 45.14 | 33.25 |
| HORVU6Hr1G077670.2 | Barley | cytosol, mitochondrion | 40.62 | 32.5 |
| HORVU3Hr1G108730.1 | Barley | cytosol, golgi, mitochondrion | 42.01 | 31.19 |
| HORVU7Hr1G122300.1 | Barley | mitochondrion | 9.72 | 28.28 |
| HORVU7Hr1G121910.1 | Barley | cytosol | 7.99 | 26.14 |
| CDY51272 | Canola | cytosol | 22.57 | 21.67 |
| CDY57461 | Canola | cytosol | 22.22 | 21.33 |
| CDX72259 | Canola | cytosol | 15.28 | 21.05 |
| CDY39233 | Canola | cytosol | 20.14 | 20.86 |
| CDX72258 | Canola | cytosol | 20.14 | 20.64 |
| CDY39231 | Canola | cytosol | 14.24 | 18.98 |
| CDX68681 | Canola | cytosol | 19.1 | 18.9 |
| CDY28199 | Canola | cytosol | 18.75 | 18.69 |
| CDX72257 | Canola | cytosol | 18.06 | 18.64 |
| CDX68676 | Canola | mitochondrion | 8.68 | 18.52 |
| CDY39226 | Canola | cytosol | 17.71 | 18.28 |
| CDY23249 | Canola | cytosol | 17.01 | 17.82 |
| CDY49309 | Canola | cytosol | 14.93 | 16.8 |
| CDY39232 | Canola | cytosol | 1.39 | 16.67 |
| CDY55615 | Canola | cytosol | 13.54 | 16.12 |
| CDX68675 | Canola | cytosol | 7.64 | 13.1 |
| CDY13002 | Canola | nucleus | 8.68 | 9.88 |
Protein Annotations
| EnsemblPlants:CDY51578 | EnsemblPlantsGene:GSBRNA2T00003774001 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | PANTHER:PTHR44841 | PANTHER:PTHR44841:SF2 |
| PFAM:PF13516 | ProteinID:CDY51578 | ProteinID:CDY51578.1 | SUPFAM:SSF52047 | UniParc:UPI0004EDCC38 | UniProt:A0A078IR68 |
| MapMan:19.2.2.8.1.4.6 | : | : | : | : | : |
Description
BnaAnng10820DBnaAnng10820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IR68]
Coordinates
chrLK033007:-:80413..81626
Molecular Weight (calculated)
32908.1 Da
IEP (calculated)
4.511
GRAVY (calculated)
-0.191
Length
288 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEDCKLRNW DELIPDALGL IFSHLPLQEV LTVVPRSDHL DRMLQMLINR SSGSLRKLSV TGLQNDSIFS FIAQHAGSLK TLKVPRSCLS NPGVVNVAEK
101: LSSLTFLDLS YCCKVGPEAI QAIGKHCKSL TEFSRNMHPL DVASVVSHDD EAYAIASTMP KLKRLEIAYH RVSTEGVLKI LSSCIFLEFL ELRGCWDVQL
201: DNKFFKEKFP DMKVLGPRVI GFYDMINDWE DCCSDYFSDG SDYLAWEFLE DGEMGEFYDD EFEHGWDDNF YADRFNIDLE PHIWPPSP
101: LSSLTFLDLS YCCKVGPEAI QAIGKHCKSL TEFSRNMHPL DVASVVSHDD EAYAIASTMP KLKRLEIAYH RVSTEGVLKI LSSCIFLEFL ELRGCWDVQL
201: DNKFFKEKFP DMKVLGPRVI GFYDMINDWE DCCSDYFSDG SDYLAWEFLE DGEMGEFYDD EFEHGWDDNF YADRFNIDLE PHIWPPSP
001: MEEDCEFRHW DELIPDALGL IFSHLPLQEV LTVVPRVCKA WNRAVTGPYC WQEIDIELWS NRFHQSDHLD RMLEMLIPRS AGSLRKLSVT GLRNDSIFSF
101: IAQHAGSLKT LKVPRSGLTN SGVVNVAEKL SSLTFLDLSY CCKIGPEAIQ AIGKHCKSLR EFCRNMHPLD VASVVSHDDE AYAIANTMPK LKRLEIAYHR
201: VSTEGVLKIL SCCVFLEFLE LRGCWDVQLD NKFFKEKFPD MKVLGPRVIG FYDMINDWED CCSDYFSDGS DYLAWEFFED GVMGEFYEDE FEHGWDDNFY
301: AENAVLDMEP HIWPPSP
101: IAQHAGSLKT LKVPRSGLTN SGVVNVAEKL SSLTFLDLSY CCKIGPEAIQ AIGKHCKSLR EFCRNMHPLD VASVVSHDDE AYAIANTMPK LKRLEIAYHR
201: VSTEGVLKIL SCCVFLEFLE LRGCWDVQLD NKFFKEKFPD MKVLGPRVIG FYDMINDWED CCSDYFSDGS DYLAWEFFED GVMGEFYEDE FEHGWDDNFY
301: AENAVLDMEP HIWPPSP
Arabidopsis Description
FBW2FBW2 [Source:UniProtKB/TrEMBL;Acc:A0A178UUC5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.