Factsheet for Zm00001d052200_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0757700-01	Rice	cytosol	78.81	81.48
EES07216	Sorghum	cytosol, golgi, mitochondrion, plastid	87.76	80.55
Zm00001d018111_P002	Maize	cytosol	80.9	77.65
TraesCS6B01G347000.1	Wheat	cytosol	75.22	77.06
TraesCS6A01G316400.1	Wheat	cytosol	72.84	73.72
HORVU6Hr1G077730.1	Barley	mitochondrion	52.24	68.9
HORVU6Hr1G077670.2	Barley	cytosol, mitochondrion	70.15	65.28
GSMUA_Achr6P30460_001	Banana	cytosol	62.69	65.02
TraesCS6D01G296000.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	74.03	63.43
GSMUA_Achr3P06570_001	Banana	cytosol	60.6	63.24
GSMUA_AchrUn_...	Banana	cytosol	60.3	62.93
GSMUA_Achr9P14880_001	Banana	cytosol	60.0	62.62
VIT_00s0391g00040.t01	Wine grape	cytosol	51.34	54.26
PGSC0003DMT400041822	Potato	cytosol	51.04	53.27
VIT_18s0001g06220.t01	Wine grape	cytosol	45.97	52.74
Solyc11g009050.1.1	Tomato	cytosol	51.04	51.82
KRH62319	Soybean	cytosol	48.06	50.16
KRH53038	Soybean	cytosol	47.76	49.84
AT4G08980.2	Thale cress	cytosol	46.87	49.53
Bra000662.1-P	Field mustard	cytosol	45.97	48.43
CDY05035	Canola	cytosol	45.67	48.11
CDX90703	Canola	cytosol	45.67	48.11
Bra038402.1-P	Field mustard	cytosol	45.07	47.63
CDX75124	Canola	cytosol	40.0	47.02
PGSC0003DMT400043293	Potato	cytosol	29.55	46.7
CDY51578	Canola	cytosol	39.4	45.83
Zm00001d050166_P001	Maize	cytosol, extracellular	20.3	21.52

Protein Annotations

EMBL:BT037779	EMBL:BT054952	EMBL:BT060476	EMBL:BT066476	EnsemblPlants:Zm00001d052200_P001	EnsemblPlants:Zm00001d052200_T001
EnsemblPlantsGene:Zm00001d052200	EntrezGene:100285680	Gene3D:1.20.1280.50	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_dom_sf
PANTHER:PTHR44841	PANTHER:PTHR44841:SF2	ProteinID:AQK56458.1	ProteinID:AQK56460.1	ProteinID:AQK56461.1	ProteinID:AQK56462.1
SEG:seg	SUPFAM:SSF52047	UniParc:UPI00017B6A45	UniProt:B4FKZ1	MapMan:19.2.2.8.1.4.6	:

Description

F-box protein FBW2

Coordinates

chr4:-:183162057..183165302

Molecular Weight (calculated)

37916.5 Da

IEP (calculated)

4.169

GRAVY (calculated)

-0.295

Length

335 amino acids

Sequence
(BLAST)

001: MGECEDGKEY RCWEELLPDA LGLIFRNLPL QEVLTVLPRV CKSWGRVVAG PYCWQEIDIE EWSQQQSKPE QIGRMVELLV GRSGGSCRRI SVSGLPCDPL
101: FSFIADNARA LGTLEIPRSE ISDSVVEAVA PRLSNVTFLD ISSCTKIGAR ALEAFGRHCR SLVGLRRVMH PIDLADKVCQ HDEAHAIARS MPRLRHLEMG
201: YMLVATEAVL EILEQCSELK FLDLRGCWAV DDRFLRERHP GLRVLGPRVV DDCYENSYWE ECSDYYSDED EDYDDDVVSW GLFVDDDDDY YYAVGSDDDE
301: AIWDDAQGLE NLEVRFYGGG GFGESFAGFD WPPSP

Best Arabidopsis Sequence Match ( AT4G08980.3 )
(BLAST)

001: MEEDCEFRHW DELIPDALGL IFSHLPLQEV LTVVPRVCKA WNRAVTGPYC WQEIDIELWS NRFHQSDHLD RMLEMLIPRS AGSLRKLSVT GLRNDSIFSF
101: IAQHAGSLKT LKVPRSGLTN SGVVNVAEKL SSLTFLDLSY CCKIGPEAIQ AIGKHCKSLR EFCRNMHPLD VASVVSHDDE AYAIANTMPK LKRLEIAYHR
201: VSTEGVLKIL SCCVFLEFLE LRGCWDVQLD NKFFKEKFPD MKVLGPRVIG FYDMINDWED CCSDYFSDGS DYLAWEFFED GVMGEFYEDE FEHGWDDNFY
301: AENAVLDMEP HIWPPSP

Arabidopsis Description

FBW2FBW2 [Source:UniProtKB/TrEMBL;Acc:A0A178UUC5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.