Factsheet for Zm00001d018111_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052200_P001	Maize	cytosol	77.65	80.9
Os02t0757700-01	Rice	cytosol	73.64	79.32
TraesCS6B01G347000.1	Wheat	cytosol	69.91	74.62
EES07216	Sorghum	cytosol, golgi, mitochondrion, plastid	77.65	74.25
TraesCS6A01G316400.1	Wheat	cytosol	69.05	72.81
HORVU6Hr1G077730.1	Barley	mitochondrion	50.72	69.69
HORVU6Hr1G077670.2	Barley	cytosol, mitochondrion	65.33	63.33
TraesCS6D01G296000.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	69.05	61.64
GSMUA_Achr6P30460_001	Banana	cytosol	55.59	60.06
GSMUA_Achr3P06570_001	Banana	cytosol	54.44	59.19
GSMUA_Achr9P14880_001	Banana	cytosol	53.58	58.26
GSMUA_AchrUn_...	Banana	cytosol	53.3	57.94
VIT_00s0391g00040.t01	Wine grape	cytosol	49.86	54.89
PGSC0003DMT400041822	Potato	cytosol	48.42	52.65
Solyc11g009050.1.1	Tomato	cytosol	48.71	51.52
VIT_18s0001g06220.t01	Wine grape	cytosol	42.41	50.68
KRH62319	Soybean	cytosol	44.7	48.6
KRH53038	Soybean	cytosol	44.41	48.29
AT4G08980.2	Thale cress	cytosol	43.84	48.27
Bra000662.1-P	Field mustard	cytosol	42.69	46.86
Bra038402.1-P	Field mustard	cytosol	42.41	46.69
CDX90703	Canola	cytosol	42.41	46.54
CDY05035	Canola	cytosol	42.41	46.54
CDX75124	Canola	cytosol	37.54	45.96
PGSC0003DMT400043293	Potato	cytosol	27.51	45.28
CDY51578	Canola	cytosol	36.96	44.79
Zm00001d050166_P001	Maize	cytosol, extracellular	18.62	20.57

Protein Annotations

EnsemblPlants:Zm00001d018111_P002	EnsemblPlants:Zm00001d018111_T002	EnsemblPlantsGene:Zm00001d018111	EntrezGene:100273637	Gene3D:1.20.1280.50	Gene3D:3.80.10.10
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:F-box-like_dom_sf	InterPro:IPR032675	InterPro:LRR_dom_sf
PANTHER:PTHR44841	PANTHER:PTHR44841:SF2	ProteinID:AQK75037.1	SEG:seg	SUPFAM:SSF52047	SUPFAM:SSF81383
UniParc:UPI00084286B2	UniProt:A0A1D6HKS6	MapMan:19.2.2.8.1.4.6	:	:	:

Description

F-box protein FBW2

Coordinates

chr5:+:214559308..214562494

Molecular Weight (calculated)

39264.1 Da

IEP (calculated)

4.291

GRAVY (calculated)

-0.373

Length

349 amino acids

Sequence
(BLAST)

001: MGECEDGKEY RCWEELLPDA LGLIFRNLPL QEVLTVLPRV CKSWGRVVAG PYCWQEIDIE EWSQQQGKPE QIARMVELLV GRSAGSCRRI SVSGLPCDPR
101: FSFIGDKSAE NVSVCSEFLT CKSSARALRT LEIPRSEISD SMVESVAPRL PNVTFLDISS CTKMGARGLE AFGKHCKSLA GLRRVMHPID LADRACQHDE
201: AHAIACSMPR LRHLEMGYML VATEAVAEIL GRCRELRFLD LRGCWAVDDK LLPRDRHPGL RVLGPRVDDC YENSYWEECS DDYSDDSSIY SWELMDDVDD
301: DYDYAAGSDD DDDEAVWDDD GQGLENLEVR FYGGGFGETF AGFDWPPSP

Best Arabidopsis Sequence Match ( AT4G08980.1 )
(BLAST)

001: MEEDCEFRHW DELIPDALGL IFSHLPLQEV LTVVPRVCKA WNRAVTGPYC WQEIDIELWS NRFHQSDHLD RMLEMLIPRS AGSLRKLSVT GLRNDSIFSF
101: IAQHAGSLKT LKVPRSGLTN SGVVNVAEKL SSLTFLDLSY CCKIGPEAIQ AIGKHCKSLR EFCRNMHPLD VASVVSHDDE AYAIANTMPK LKRLEIAYHR
201: VSTEGVLKIL SCCVFLEFLE LRGCWDVQLD NKFFKEKFPD MKVLGPRVIG FYDMINDWED CCSDYFSDGS DYLAWEFFED GVMGEFYEDE FEHGWDDNFY
301: AENAVLDMEP HIWPPSP

Arabidopsis Description

FBW2FBW2 [Source:UniProtKB/TrEMBL;Acc:A0A178UUC5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.