Factsheet for TraesCS6A01G316400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G347000.1	Wheat	cytosol	89.12	90.21
HORVU6Hr1G077730.1	Barley	mitochondrion	67.98	88.58
TraesCS6D01G296000.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	89.73	75.96
HORVU6Hr1G077670.2	Barley	cytosol, mitochondrion	80.66	74.17
Os02t0757700-01	Rice	cytosol	71.3	72.84
Zm00001d052200_P001	Maize	cytosol	73.72	72.84
Zm00001d018111_P002	Maize	cytosol	72.81	69.05
TraesCS7A01G178000.1	Wheat	cytosol	64.95	66.15
EES07216	Sorghum	cytosol, golgi, mitochondrion, plastid	71.0	64.38
GSMUA_Achr6P30460_001	Banana	cytosol	56.19	57.59
GSMUA_Achr9P14880_001	Banana	cytosol	55.29	57.01
GSMUA_AchrUn_...	Banana	cytosol	54.98	56.7
GSMUA_Achr3P06570_001	Banana	cytosol	54.68	56.39
TraesCS3A01G490000.1	Wheat	cytosol, golgi, nucleus	54.08	53.27
VIT_18s0001g06220.t01	Wine grape	cytosol	45.02	51.03
VIT_00s0391g00040.t01	Wine grape	cytosol	48.64	50.79
PGSC0003DMT400041822	Potato	cytosol	49.24	50.78
Solyc11g009050.1.1	Tomato	cytosol	49.24	49.39
AT4G08980.2	Thale cress	cytosol	45.62	47.63
Bra000662.1-P	Field mustard	cytosol	45.62	47.48
CDY05035	Canola	cytosol	45.32	47.17
CDX90703	Canola	cytosol	45.32	47.17
Bra038402.1-P	Field mustard	cytosol	45.02	47.0
CDX75124	Canola	cytosol	38.97	45.26
KRH62319	Soybean	cytosol	43.81	45.17
CDY51578	Canola	cytosol	39.27	45.14
KRH53038	Soybean	cytosol	43.5	44.86
PGSC0003DMT400043293	Potato	cytosol	28.1	43.87
TraesCS2A01G316800.1	Wheat	nucleus	24.17	19.51
TraesCS1A01G056500.2	Wheat	cytosol	19.34	18.23

Protein Annotations

EnsemblPlants:TraesCS6A01G316400.1	EnsemblPlantsGene:TraesCS6A01G316400	Gene3D:1.20.1280.50	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_dom_sf
PANTHER:PTHR44841	PANTHER:PTHR44841:SF2	SEG:seg	SUPFAM:SSF52047	MapMan:19.2.2.8.1.4.6	:

Description

No Description!

Coordinates

chr6A:-:552832282..552833355

Molecular Weight (calculated)

37145.6 Da

IEP (calculated)

4.257

GRAVY (calculated)

-0.256

Length

331 amino acids

Sequence
(BLAST)

001: MGESEYRCWE ELLPDALGLV FRNLPLQEVL TVVPRVCKSW GRVVAGPYCW QEIDIEEWSQ QRHSRPDHLV RMLDLLLRRS SGACRRICVS GLPCDPLFSF
101: IGDHARALRT LEIPRSEISD AVVEAVAPGL PNLTFLDVSS CTKIGARALE AFGRHCRSLA ALRRVMHPID VAGRNACGQH DEARAIARTM PALRHLEVGY
201: MLVTTEAILE VLSRCRGLEF VDLRGCWAVD EALLRERHPR LSVLGPGVDD CFENSYWEEC SDDDDDDSDD DDDVYSWELM DDDEYYGVVG SDDDDEAVWG
301: DGPGLVENLE VRFYGGGFSE SYAGFDWPAS P

Best Arabidopsis Sequence Match ( AT4G08980.3 )
(BLAST)

001: MEEDCEFRHW DELIPDALGL IFSHLPLQEV LTVVPRVCKA WNRAVTGPYC WQEIDIELWS NRFHQSDHLD RMLEMLIPRS AGSLRKLSVT GLRNDSIFSF
101: IAQHAGSLKT LKVPRSGLTN SGVVNVAEKL SSLTFLDLSY CCKIGPEAIQ AIGKHCKSLR EFCRNMHPLD VASVVSHDDE AYAIANTMPK LKRLEIAYHR
201: VSTEGVLKIL SCCVFLEFLE LRGCWDVQLD NKFFKEKFPD MKVLGPRVIG FYDMINDWED CCSDYFSDGS DYLAWEFFED GVMGEFYEDE FEHGWDDNFY
301: AENAVLDMEP HIWPPSP

Arabidopsis Description

FBW2FBW2 [Source:UniProtKB/TrEMBL;Acc:A0A178UUC5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.